RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 STAT5BP51692 787 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 SPIRE1Q08AE8 756 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 MFSD10Q14728 455 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 FAM47CQ5HY64 1035 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 FAM160B1Q5W0V3 765 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 PDXDC2PQ6P474 469 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 B3GNT9Q6UX72 402 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 KAT2BQ92831 832 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 SMARCAD1Q9H4L7 1026 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 RGL1Q9NZL6 768 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 KAT6AQ92794 2004 aa15.63■□□□□ 0.09
TPM3-211ENST00000368531 PP2D1A8MPX8 630 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 LGR5O75473 907 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 CABYRO75952 493 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 CAPN2P17655 700 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 CDC25AP30304 524 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 NASPP49321 788 aaPredicted RBP15.62■□□□□ 0.09
TPM3-211ENST00000368531 FXR2P51116 673 aaKnown RBP eCLIP15.62■□□□□ 0.092e-6■■■□□ 15.5
TPM3-211ENST00000368531 KRT85P78386 507 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 CYP4A11Q02928 519 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 GRIN1Q05586 938 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 CTTNQ14247 550 aaKnown RBP15.62■□□□□ 0.09
TPM3-211ENST00000368531 SLC39A14Q15043 492 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 EPHA7Q15375 998 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 UGCGQ16739 394 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 NBPF20Q3BBV1 942 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 RDM1Q8NG50 284 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 DYDC2Q96IM9 177 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 EIF2AK1Q9BQI3 630 aaKnown RBP15.62■□□□□ 0.09
TPM3-211ENST00000368531 KATNAL1Q9BW62 490 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 RNPEPQ9H4A4 650 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 LRWD1Q9UFC0 647 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 CFAP45Q9UL16 551 aa15.62■□□□□ 0.09
TPM3-211ENST00000368531 ZNF215Q9UL58 517 aaPredicted RBP15.62■□□□□ 0.09
TPM3-211ENST00000368531 IGKV6D-21A0A0A0MT36 114 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 SPTLC2O15270 562 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 F2P00734 622 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 COL6A1P12109 1028 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 TPRNQ4KMQ1 711 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 SPECC1Q5M775 1068 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 ARL6IP4Q66PJ3 421 aaKnown RBP15.61■□□□□ 0.09
TPM3-211ENST00000368531 ATL3Q6DD88 541 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 SLC39A5Q6ZMH5 540 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 TPH2Q8IWU9 490 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 LINC00301Q8NCQ3 95 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 CLIC6Q96NY7 704 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 RAB34Q9BZG1 259 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 ERAP1Q9NZ08 941 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 TRIP12Q14669 1992 aaPredicted RBP15.61■□□□□ 0.09
TPM3-211ENST00000368531 SCN10AQ9Y5Y9 1956 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 GRIN2DO15399 1336 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 EMSYQ7Z589 1322 aa15.61■□□□□ 0.09
TPM3-211ENST00000368531 A0A087WWV3 80 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 A0A0U1RQG5 324 aaPredicted RBP15.6■□□□□ 0.09
TPM3-211ENST00000368531 YEATS4O95619 227 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 PLCB4Q15147 1175 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 ZRSR1Q15695 479 aaKnown RBP15.6■□□□□ 0.09
TPM3-211ENST00000368531 PLPPR4Q7Z2D5 763 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 ERMNQ8TAM6 284 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 GDPD2Q9HCC8 539 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 HDAC6Q9UBN7 1215 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 FBXO2Q9UK22 296 aaPredicted RBP15.6■□□□□ 0.09
TPM3-211ENST00000368531 TRPC6Q9Y210 931 aa15.6■□□□□ 0.09
TPM3-211ENST00000368531 HAS3O00219 553 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 ZNF862O60290 1169 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 P4HBP07237 508 aaKnown RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 ATP4AP20648 1035 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 CCT6AP40227 531 aaKnown RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 QARSP47897 775 aaKnown RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 PSMC5P62195 406 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 IGBP1P78318 339 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 PRKCEQ02156 737 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 PDIA5Q14554 519 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 LRRC26Q2I0M4 334 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 UBE2Q1Q7Z7E8 422 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 C7orf31Q8N865 590 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 IGSF22Q8N9C0 903 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 KRI1Q8N9T8 703 aaKnown RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 AFAP1L1Q8TED9 768 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 SNX29Q8TEQ0 813 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 ATP6V0A1Q93050 837 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 SPATA32Q96LK8 384 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 LXNQ9BS40 222 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 CSRNP2Q9H175 543 aa15.59■□□□□ 0.09
TPM3-211ENST00000368531 WRAP73Q9P2S5 460 aaPredicted RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 SRPRBQ9Y5M8 271 aaKnown RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 MAFBQ9Y5Q3 323 aaPredicted RBP15.59■□□□□ 0.09
TPM3-211ENST00000368531 POTEB3A0JP26 581 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 TMEM150BA6NC51 233 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 DDX11L8A8MPP1 907 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 ARVCFO00192 962 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 MED24O75448 989 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 SLITRK3O94933 977 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 SMIM10L2AP0DMW4 78 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 SMIM10L2BP0DMW5 78 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 ME1P48163 572 aa15.58■□□□□ 0.08
TPM3-211ENST00000368531 TRIM60Q495X7 471 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms