RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 GOLGA8SH3BPF8 625 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
PTPRK-203ENST00000368207 CCDC170Q8IYT3 715 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 NEURL4Q96JN8 1562 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 REREQ9P2R6 1566 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 RNF8O76064 485 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 GYS1P13807 737 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 HMGCS2P54868 508 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 KRT81Q14533 505 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-203ENST00000368207 RSAD2Q8WXG1 361 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 STIM2Q9P246 746 aa13.38□□□□□ -0.27
PTPRK-203ENST00000368207 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 CCDC117Q8IWD4 279 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 GIMAP7Q8NHV1 300 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 NSUN6Q8TEA1 469 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 ZMYND15Q9H091 742 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 SEC31AO94979 1220 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 NR3C1P04150 777 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 MTMR3Q13615 1198 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 ALKBH5Q6P6C2 394 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 TOGARAM2Q6ZUX3 1019 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 SH2D3AQ9BRG2 576 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 ZNF148Q9UQR1 794 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 SERPING1P05155 500 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 KIF22Q14807 665 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 STXBP2Q15833 593 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 THNSL1Q8IYQ7 743 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 NLRP7Q8WX94 980 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 PARP2Q9UGN5 583 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 DCCP43146 1447 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 SLC16A4O15374 487 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 PDHBP11177 359 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 CASP7P55210 303 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 SPOUT1Q5T280 376 aaKnown RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 CTAGE3PQ8IX95 158 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 ANKRD36BP1Q96IX9 119 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-203ENST00000368207 PHLPP2Q6ZVD8 1323 aa13.37□□□□□ -0.27
PTPRK-203ENST00000368207 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 TLR3O15455 904 aaKnown RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 ABL1P00519 1130 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 MAPK4P31152 587 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 C3orf67Q6ZVT6 689 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 MGARPQ8TDB4 240 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 TBC1D22BQ9NU19 505 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 CNOT7Q9UIV1 285 aaKnown RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 GCLMP48507 274 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 JAK3P52333 1124 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 TROAPQ12815 778 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 SCARA5Q6ZMJ2 495 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 DPF2Q92785 391 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 ZNF668Q96K58 619 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 MSTO1Q9BUK6 570 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 NCOA3Q9Y6Q9 1424 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 NDC80O14777 642 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 ATP1A2P50993 1020 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 USP11P51784 963 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 MRPS9P82933 396 aaKnown RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 C10orf67Q8IYJ2 551 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 FAM149B1Q96BN6 582 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 RPS6KC1Q96S38 1066 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 SMC6Q96SB8 1091 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 RPAP3Q9H6T3 665 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-203ENST00000368207 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 POLLQ9UGP5 575 aa13.36□□□□□ -0.27
PTPRK-203ENST00000368207 FGFR2P21802 821 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 ANKRD42Q8N9B4 389 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 LXNQ9BS40 222 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 CNTNAP5Q8WYK1 1306 aa13.35□□□□□ -0.27
PTPRK-203ENST00000368207 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms