RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L20D6RJB6 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 PJA2O43164 708 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 GFPT2O94808 682 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 FAM107AO95990 144 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 IFNAR2P48551 515 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L24Q0WX57 530 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 SF3B3Q15393 1217 aaKnown RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 MSL1Q68DK7 614 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 GJB7Q6PEY0 223 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 USP17L6PQ6QN14 398 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 POTEGQ6S5H5 508 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 POTEEQ6S8J3 1075 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 DPP8Q6V1X1 898 aaPredicted RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 CCDC25Q86WR0 208 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 SPATS2Q86XZ4 545 aaKnown RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 DYDC1Q8WWB3 177 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 RUBCNQ92622 972 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 TRIM51Q9BSJ1 452 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 HAUS2Q9NVX0 235 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 BAIAP2L1Q9UHR4 511 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 CICQ96RK0 1608 aaPredicted RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 SFI1A8K8P3 1242 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 GNPATO15228 680 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 CTNND1O60716 968 aaKnown RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 ECM2O94769 699 aaPredicted RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 FGGP02679 453 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 RPSAP08865 295 aaKnown RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 FLT3P36888 993 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 SLCO1A2P46721 670 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 ZNF211Q13398 564 aaPredicted RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 TTBK2Q6IQ55 1244 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 PNMA8AQ86V59 439 aaPredicted RBP8.94□□□□□ -0.98
CD46-208ENST00000367042 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 ANKRD36CQ5JPF3 1778 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 SRCAPQ6ZRS2 3230 aa8.94□□□□□ -0.98
CD46-208ENST00000367042 NOL4O94818 638 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 GCNT3O95395 438 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 VIMP08670 466 aaKnown RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 H2AFZP0C0S5 128 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 CCDC172P0C7W6 258 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 MKRN4PQ13434 485 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 PLS1Q14651 629 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 GKAP1Q5VSY0 366 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 H2AFVQ71UI9 128 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 ZNF804AQ7Z570 1209 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 MARCH10Q8NA82 808 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 RDH13Q8NBN7 331 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 CXorf56Q9H5V9 222 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PSTPIP2Q9H939 334 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 DCDC2CA8MYV0 355 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 C6orf229H3BNL8 230 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 UFL1O94874 794 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 MRPL12P52815 198 aaKnown RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 PLTPP55058 493 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PSMD2Q13200 908 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 ITGB3BPQ13352 177 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 NFIXQ14938 502 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PPP1R7Q15435 360 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 ARHGAP44Q17R89 818 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 ASTE1Q2TB18 679 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 MFSD14BQ5SR56 506 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 ZNF571Q7Z3V5 609 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 CNPY4Q8N129 248 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PROM2Q8N271 834 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PRPF38AQ8NAV1 312 aaKnown RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 MGARPQ8TDB4 240 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 CUL5Q93034 780 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 INPP4AQ96PE3 977 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 ISCUQ9H1K1 167 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 TMBIM4Q9HC24 238 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 SLC40A1Q9NP59 571 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 TAF1P21675 1872 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 SPDYE3A6NKU9 549 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 BUB1BO60566 1050 aaPredicted RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 CLSTN1O94985 981 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 LCA5LO95447 670 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 GNA14O95837 355 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 UCHL3P15374 230 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 ZNF76P36508 570 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PPP2R2AP63151 447 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 QPCTQ16769 361 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PRR16Q569H4 304 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 LMBR1Q8WVP7 490 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 PIK3R5Q8WYR1 880 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 NYXQ9GZU5 481 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 NEUROG2Q9H2A3 272 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 GCNT4Q9P109 453 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 GGT7Q9UJ14 662 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 AMFRQ9UKV5 643 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 RTCBQ9Y3I0 505 aaKnown RBP8.93□□□□□ -0.98
CD46-208ENST00000367042 SPATA31A1Q5TZJ5 1347 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 SLIT2O94813 1529 aa8.93□□□□□ -0.98
CD46-208ENST00000367042 CHUKO15111 745 aa8.92□□□□□ -0.98
CD46-208ENST00000367042 TBCAO75347 108 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms