RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MT-ND3P03897 115 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 TMEM191BP0C7N4 346 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 CDK8P49336 464 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 UBXN2AP68543 259 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 BEND6Q5SZJ8 279 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 MAP7D3Q8IWC1 876 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 FUCA2Q9BTY2 467 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 DNAJC12Q9UKB3 198 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 FDPSP14324 419 aaKnown RBP16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 PIK3CAP42336 1068 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 COG7P83436 770 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 KCNB1Q14721 858 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 DOK7Q18PE1 504 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 SLC17A8Q8NDX2 589 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 TRIM6Q9C030 488 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 TTLL3Q9Y4R7 772 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 TNNC2P02585 160 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 NXNQ6DKJ4 435 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 CCNI2Q6ZMN8 369 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 ATG9AQ7Z3C6 839 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 ZBTB8OSQ8IWT0 167 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 SPICE1Q8N0Z3 855 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 PIGBQ92521 554 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 FAM81BQ96LP2 452 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 SYNGAP1Q96PV0 1343 aa16.85■□□□□ 0.29
TRAPPC11-202ENST00000357207 H0YIN7 160 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 CYP2D6P10635 497 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 PDE1BQ01064 536 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 DBN1Q16643 649 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 CDKL2Q92772 493 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 PFDN4Q9NQP4 134 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 FOXO4P98177 505 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 HSP90AA5PQ58FG0 334 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 VCX3AQ9NNX9 186 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 MEFVO15553 781 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 USP49Q70CQ1 688 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 ITIH6Q6UXX5 1313 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 PPP2R5CQ13362 524 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 RIN2Q8WYP3 895 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
TRAPPC11-202ENST00000357207 RNF17Q9BXT8 1623 aaKnown RBP16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 CTDNEP1O95476 244 aa16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 ESRRAP11474 423 aaPredicted RBP16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 ANO3Q9BYT9 981 aa16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 CCPG1Q9ULG6 757 aa16.83■□□□□ 0.29
TRAPPC11-202ENST00000357207 PACSIN2Q9UNF0 486 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC11-202ENST00000357207 WDR91A4D1P6 747 aa16.83■□□□□ 0.28
TRAPPC11-202ENST00000357207 ZNF185O15231 689 aa16.83■□□□□ 0.28
TRAPPC11-202ENST00000357207 NMT2O60551 498 aa16.83■□□□□ 0.28
TRAPPC11-202ENST00000357207 RPS6KA2Q15349 733 aa16.83■□□□□ 0.28
TRAPPC11-202ENST00000357207 BSDC1Q9NW68 430 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC11-202ENST00000357207 CPDO75976 1380 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 TRIM50Q86XT4 487 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 HESX1Q9UBX0 185 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 KRT1P04264 644 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 H2AFXP16104 143 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 POLGP54098 1239 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 MUM1L1Q5H9M0 696 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 PPP1R2P3Q6NXS1 205 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 FAM47EQ6ZV65 393 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 NOA1Q8NC60 698 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 PROCA1Q8NCQ7 364 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 RUBCNQ92622 972 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 RAD54LQ92698 747 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 CHMP6Q96FZ7 201 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 ISCA1Q9BUE6 129 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 ANKFY1Q9P2R3 1169 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 BMP3P12645 472 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 PLA2G4AP47712 749 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 PMS2P54278 862 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 COASYQ13057 564 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 SPARCL1Q14515 664 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 BRDTQ58F21 947 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 ANKRD40Q6AI12 368 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 RFX6Q8HWS3 928 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 SUPT20HQ8NEM7 779 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 SLITRK6Q9H5Y7 841 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 PRDX5P30044 214 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 POLE2P56282 527 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 HDLBPQ00341 1268 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 BBS9Q3SYG4 887 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 RINT1Q6NUQ1 792 aa16.82■□□□□ 0.28
TRAPPC11-202ENST00000357207 ADSSL1Q8N142 457 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms