RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DESI2Q9BSY9 194 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SRPRBQ9Y5M8 271 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 NBASA2RRP1 2371 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 CFAP69A5D8W1 941 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TAF5LO75529 589 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MBD4O95243 580 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MARK3P27448 753 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ICA1Q05084 483 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 LETM2Q2VYF4 491 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PIK3AP1Q6ZUJ8 805 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PHF23Q9BUL5 403 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 GCOM2Q9BZD3 368 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 USP44Q9H0E7 712 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TAF1DQ9H5J8 278 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PREX2Q70Z35 1606 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 XPOTO43592 962 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 LONRF3Q496Y0 759 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 NACA2Q9H009 215 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 NRDE2Q9H7Z3 1164 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 SNUPNO95149 360 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 TFCP2Q12800 502 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 BFSP1Q12934 665 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 SNX1Q13596 522 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 CASC4Q6P4E1 433 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 FRMD8P1Q9BZ68 369 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ENOPH1Q9UHY7 261 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 CUL9Q8IWT3 2517 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 TTC36A6NLP5 189 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 PDIA3P30101 505 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 NLRP11P59045 1033 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 PNOCQ13519 176 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 WDR11Q9BZH6 1224 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 TMX1Q9H3N1 280 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 GCNT4Q9P109 453 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 LRCH1Q9Y2L9 728 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 RPS6KA5O75582 802 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 FMNL1O95466 1100 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 IFNB1P01574 187 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 SLC44A4Q53GD3 710 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 MMADHCQ9H3L0 296 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ANAPC5Q9UJX4 755 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 V9GY48 417 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 FRMPD1Q5SYB0 1578 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 PYGMP11217 842 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 CA4P22748 312 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 GRIN1Q05586 938 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 UAP1Q16222 522 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 SPATA5Q8NB90 893 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 NT5C1BQ96P26 610 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 KPNA7A9QM74 516 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 SERPINI2O75830 405 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 GCNT3O95395 438 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ZSCAN20P17040 1043 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 RASGRP2Q7LDG7 609 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 RPS6KC1Q96S38 1066 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 NHEJ1Q9H9Q4 299 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 C8orf4Q9NR00 106 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 UNC13BO14795 1591 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 H2AFYO75367 372 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 KRT7P08729 469 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 DPCR1Q3MIW9 517 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 BBS5Q8N3I7 341 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 POLR3CQ9BUI4 534 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 TRAF3IP3Q9Y228 551 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ANKARQ7Z5J8 1434 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 PDE8AO60658 829 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 FCGR1AP12314 374 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ADAM9Q13443 819 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 EPM2AIP1Q7L775 607 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 CABP7Q86V35 215 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 GPBP1Q86WP2 473 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 KCNK16Q96T55 309 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ANKFY1Q9P2R3 1169 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 DDX25Q9UHL0 483 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 H7C0S8 307 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 IRS4O14654 1257 aaPredicted RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 GAS7O60861 476 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 PPARAQ07869 468 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 RNF207Q6ZRF8 634 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 TRIM69Q86WT6 500 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 KANSL1LA0AUZ9 987 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 FNTAP49354 379 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 TMED10P49755 219 aaKnown RBP7.05□□□□□ -1.28
VPS13B-202ENST00000357162 ZNF174Q15697 407 aa7.05□□□□□ -1.28
VPS13B-202ENST00000357162 KRT81Q14533 505 aa7.04□□□□□ -1.28
VPS13B-202ENST00000357162 C4orf22Q6V702 233 aa7.04□□□□□ -1.28
VPS13B-202ENST00000357162 PLEKHG3A1L390 1219 aa7.04□□□□□ -1.28
VPS13B-202ENST00000357162 NEURL1BA8MQ27 555 aa7.04□□□□□ -1.28
VPS13B-202ENST00000357162 TAC1P20366 129 aa7.04□□□□□ -1.28
VPS13B-202ENST00000357162 TBXAS1P24557 533 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-202ENST00000357162 TRMT5Q32P41 509 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms