RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 GOLGA8BA8MQT2 603 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 hCG_1984214I3L0E3 225 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 LPXNO60711 386 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 KCNQ1P51787 676 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 IGBP1P78318 339 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 ADAM17P78536 824 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 HTRA4P83105 476 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-204ENST00000356316 COL9A3Q14050 684 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-204ENST00000356316 IER5Q5VY09 327 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-204ENST00000356316 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
CAPN3-204ENST00000356316 SIP14410 1827 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 M0QZ92 97 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 CHRNA1P02708 482 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 CEP55Q53EZ4 464 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-204ENST00000356316 DNAJB3Q8WWF6 145 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 SPOCK2Q92563 424 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CAPN3-204ENST00000356316 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
CAPN3-204ENST00000356316 NFASCO94856 1347 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 STXBP3O00186 592 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 GHRP10912 638 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 INSRRP14616 1297 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPN3-204ENST00000356316 STAT5BP51692 787 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 RCAN1P53805 252 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 ACTR2P61160 394 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 AKAP17AQ02040 695 aaKnown RBP12.15□□□□□ -0.46
CAPN3-204ENST00000356316 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 GPM6BQ13491 265 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 ADCK5Q3MIX3 580 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 RUFY4Q6ZNE9 571 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 Q6ZUG5 572 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 PLPPR4Q7Z2D5 763 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 SKAP1Q86WV1 359 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 TMEM192Q8IY95 271 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 FIBCD1Q8N539 461 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-204ENST00000356316 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 AGO4Q9HCK5 861 aaKnown RBP12.15□□□□□ -0.46
CAPN3-204ENST00000356316 C6orf50Q9HD87 102 aa12.15□□□□□ -0.46
CAPN3-204ENST00000356316 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-204ENST00000356316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 MBLAC1A4D2B0 266 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 H3BNC9 293 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 MEIS1O00470 390 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 ENPP3O14638 875 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 BACH1O14867 736 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 ARP10275 920 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 SLC26A2P50443 739 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 MRPS6P82932 125 aaKnown RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 LPIN1Q14693 890 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 MARCH8Q5T0T0 291 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 NME8Q8N427 588 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 MRPL38Q96DV4 380 aaKnown RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 NECAB3Q96P71 396 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 OSBPL7Q9BZF2 842 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-204ENST00000356316 TMEM260Q9NX78 707 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
CAPN3-204ENST00000356316 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 SCG2P13521 617 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 GNA11P29992 359 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 CDC27P30260 824 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
CAPN3-204ENST00000356316 SREBF1P36956 1147 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 FUT2Q10981 343 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 PLCB4Q15147 1175 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 PFKFB3Q16875 520 aaPredicted RBP12.13□□□□□ -0.47
CAPN3-204ENST00000356316 JAKMIP3Q5VZ66 844 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 NIPA1Q7RTP0 329 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 FTHL17Q9BXU8 183 aa12.13□□□□□ -0.47
CAPN3-204ENST00000356316 RWDD3Q9Y3V2 267 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms