RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 INPP4AQ96PE3 977 aaPredicted RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 FRMD3A2A2Y4 597 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 AFPP02771 609 aaKnown RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 GYS1P13807 737 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 NOP2P46087 812 aaKnown RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 RPS6KA1Q15418 735 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 PRR16Q569H4 304 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 DCAF17Q5H9S7 520 aaPredicted RBP13.3□□□□□ -0.28
DDX4-201ENST00000353507 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 PPM1EQ8WY54 764 aa13.3□□□□□ -0.28
DDX4-201ENST00000353507 KCNK3O14649 394 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 CALUO43852 315 aaPredicted RBP13.29□□□□□ -0.28
DDX4-201ENST00000353507 ACTN1P12814 892 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
DDX4-201ENST00000353507 PABPC4Q13310 644 aaKnown RBP eCLIP13.29□□□□□ -0.28
DDX4-201ENST00000353507 AP3B2Q13367 1082 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 ARSHQ5FYA8 562 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 TCERG1LQ5VWI1 586 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 TTC19Q6DKK2 380 aaPredicted RBP13.29□□□□□ -0.28
DDX4-201ENST00000353507 FRMD5Q7Z6J6 570 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 EFCAB13Q8IY85 973 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 RABEP2Q9H5N1 569 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 BZW2Q9Y6E2 419 aaKnown RBP13.29□□□□□ -0.28
DDX4-201ENST00000353507 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 A6NNZ2 444 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 KRT14P02533 472 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 FAM153BP0C7A2 387 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 CASP5P51878 434 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 PTK2Q05397 1052 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 EXOC3L4Q17RC7 722 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 TUBB8Q3ZCM7 444 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 FAM153CQ494X1 144 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 TTC31Q49AM3 519 aaPredicted RBP13.29□□□□□ -0.28
DDX4-201ENST00000353507 KCTD16Q68DU8 428 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 SFR1Q86XK3 245 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 CERS5Q8N5B7 392 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 USP38Q8NB14 1042 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 WHAMMQ8TF30 809 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
DDX4-201ENST00000353507 FAM153AQ9UHL3 310 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 ADAMTSL1Q8N6G6 1762 aa13.29□□□□□ -0.28
DDX4-201ENST00000353507 MEIS1O00470 390 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 UCHL3P15374 230 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 SLC9A1P19634 815 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 HOXA10P31260 410 aaPredicted RBP13.28□□□□□ -0.28
DDX4-201ENST00000353507 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 KNOP1Q1ED39 458 aaKnown RBP13.28□□□□□ -0.28
DDX4-201ENST00000353507 CDC42EP5Q6NZY7 148 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 CASKIN2Q8WXE0 1202 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 REEP2Q9BRK0 252 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 EHD4Q9H223 541 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 PLCB1Q9NQ66 1216 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 LRRC37AA6NMS7 1700 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 LTBP1Q14766 1721 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 GRIN2DO15399 1336 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 CYP3A7-CYP3A51PA0A087WV96 503 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 BTNL10A8MVZ5 291 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 G3V3G9 751 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 FLOT1O75955 427 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 CLSTN1O94985 981 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 CYP3A7P24462 503 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 SKOR1P84550 965 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 GIT2Q14161 759 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 HLTFQ14527 1009 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDX4-201ENST00000353507 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 SLFN13Q68D06 897 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 UBR3Q6ZT12 1888 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
DDX4-201ENST00000353507 VPS36Q86VN1 386 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 SH2D3CQ8N5H7 860 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 DCAF4Q8WV16 495 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 TEKT1Q969V4 418 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 MXD3Q9BW11 206 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
DDX4-201ENST00000353507 SPDYE3A6NKU9 549 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 RAD51CO43502 376 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 TBCAO75347 108 aaKnown RBP13.27□□□□□ -0.28
DDX4-201ENST00000353507 KIF4AO95239 1232 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 ATP1A2P50993 1020 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 PDCLQ13371 301 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 MREGQ8N565 214 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 THSD7AQ9UPZ6 1657 aa13.27□□□□□ -0.28
DDX4-201ENST00000353507 CES2O00748 559 aa13.27□□□□□ -0.29
DDX4-201ENST00000353507 CEP104O60308 925 aa13.27□□□□□ -0.29
DDX4-201ENST00000353507 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
DDX4-201ENST00000353507 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.29
DDX4-201ENST00000353507 ALKBH5Q6P6C2 394 aaKnown RBP13.27□□□□□ -0.29
DDX4-201ENST00000353507 MAATS1Q7Z4T9 603 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms