RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NEUROG2Q9H2A3 272 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 KRT1P04264 644 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 MAEAQ7L5Y9 396 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 COG4Q9H9E3 785 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 DDX39AO00148 427 aaKnown RBP20.77■□□□□ 0.92
HDAC4-201ENST00000345617 FAM160B1Q5W0V3 765 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 ZNF790Q6PG37 636 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 PIK3R2O00459 728 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 BASP1P80723 227 aaKnown RBP20.77■□□□□ 0.92
HDAC4-201ENST00000345617 KLC1Q07866 573 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 TBC1D1Q86TI0 1168 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-201ENST00000345617 VIPAS39Q9H9C1 493 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 ZNF219Q9P2Y4 722 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-201ENST00000345617 ZNF229Q9UJW7 825 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 ACSL3O95573 720 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 GGPS1O95749 300 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 TTC13Q8NBP0 860 aa20.77■□□□□ 0.92
HDAC4-201ENST00000345617 TGS1Q96RS0 853 aaKnown RBP20.77■□□□□ 0.92
HDAC4-201ENST00000345617 CYP26B1Q9NR63 512 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 STRIP2Q9ULQ0 834 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 NFU1Q9UMS0 254 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 CDC42BPBQ9Y5S2 1711 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 A0A0G2JND7 137 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 METTL13Q8N6R0 699 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 GLG1Q92896 1179 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 TRAF3IP3Q9Y228 551 aa20.77■□□□□ 0.91
HDAC4-201ENST00000345617 CFBP00751 764 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 SURF1Q15526 300 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 SRGAP2CP0DJJ0 459 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 CYTH2Q99418 400 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 RFX1P22670 979 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 PPARGC1AQ9UBK2 798 aaKnown RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 MYO18AQ92614 2054 aaKnown RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 UFL1O94874 794 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 CDH2P19022 906 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 TMED10P49755 219 aaKnown RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 SLC39A2Q9NP94 309 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 SESN1Q9Y6P5 492 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 CUL3Q13618 768 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 BIN2Q9UBW5 565 aaPredicted RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 RANBP1P43487 201 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 ODR4Q5SWX8 454 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 ARL6IP4Q66PJ3 421 aaKnown RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 UIMC1Q96RL1 719 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 NOVA2Q9UNW9 492 aaKnown RBP20.76■□□□□ 0.91
HDAC4-201ENST00000345617 PRPSAP2O60256 369 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 BTBD6Q96KE9 485 aa20.76■□□□□ 0.91
HDAC4-201ENST00000345617 TLR3O15455 904 aaKnown RBP20.75■□□□□ 0.91
HDAC4-201ENST00000345617 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
HDAC4-201ENST00000345617 CHMP6Q96FZ7 201 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 CYLC2Q14093 348 aaPredicted RBP20.75■□□□□ 0.91
HDAC4-201ENST00000345617 DAB2IPQ5VWQ8 1189 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 PKD2L2Q9NZM6 624 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 C16orf96A6NNT2 1141 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 CTDSPL2Q05D32 466 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 ASPRV1Q53RT3 343 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 ABCB6Q9NP58 842 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 SOWAHDA6NJG2 315 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 EML4Q9HC35 981 aaKnown RBP20.75■□□□□ 0.91
HDAC4-201ENST00000345617 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 TESK2Q96S53 571 aa20.75■□□□□ 0.91
HDAC4-201ENST00000345617 YWHAHQ04917 246 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-201ENST00000345617 MCUQ8NE86 351 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 LZICQ8WZA0 190 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 PGBD1Q96JS3 809 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 GSNP06396 782 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 GGCXP38435 758 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 DPCR1Q3MIW9 517 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 ABCF3Q9NUQ8 709 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 GID8Q9NWU2 228 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
HDAC4-201ENST00000345617 IL10P22301 178 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 COPS2P61201 443 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 DDB1Q16531 1140 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 PSMC1P62191 440 aaKnown RBP20.74■□□□□ 0.91
HDAC4-201ENST00000345617 FRA10AC1Q70Z53 315 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 YIPF3Q9GZM5 350 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 DAB2P98082 770 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 ATP6V1G3Q96LB4 118 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 TMEM259Q4ZIN3 620 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 ANKRD27Q96NW4 1050 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 DBNDD2Q9BQY9 259 aa20.74■□□□□ 0.91
HDAC4-201ENST00000345617 SUPT20HQ8NEM7 779 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 CFLARO15519 480 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 FGGP02679 453 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 MAP4P27816 1152 aaKnown RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 HSPA2P54652 639 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 SLC38A10Q9HBR0 1119 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 GINS2Q9Y248 185 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 FMNL1O95466 1100 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-201ENST00000345617 AARSP49588 968 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■■■ 44.6
HDAC4-201ENST00000345617 MXD3Q9BW11 206 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 GCKRQ14397 625 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 MAGEB5Q9BZ81 275 aa20.73■□□□□ 0.91
HDAC4-201ENST00000345617 TSC22D4Q9Y3Q8 395 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms