RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CCDC58Q4VC31 144 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 BBS4Q96RK4 519 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SIKE1Q9BRV8 207 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 UPF3AQ9H1J1 476 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PPIDQ08752 370 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TBL3Q12788 808 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ASPHQ12797 758 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CYB5D1Q6P9G0 228 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GALNT8Q9NY28 637 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 STX6O43752 255 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 RAP1GAPP47736 663 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MTTPP55157 894 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 RASSF7Q02833 373 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SPARTQ8N0X7 666 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF579Q8NAF0 562 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GPN3Q9UHW5 284 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM33Q9UPN9 1127 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PTPRTO14522 1441 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PLA2R1Q13018 1463 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 IL32P24001 234 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC74AQ0VAA2 488 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 C11orf24Q96F05 449 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MED30Q96HR3 178 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ANKRD36BP1Q96IX9 119 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SYNDIG1Q9H7V2 258 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 HS2ST1Q7LGA3 356 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MLKLQ8NB16 471 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ICA1LQ8NDH6 482 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 NUP160Q12769 1436 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MYOM2P54296 1465 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 RPRD2Q5VT52 1461 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 NBPF26B4DH59 902 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SCG2P13521 617 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TARSP26639 723 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PLEKHO1Q53GL0 409 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 DGKKQ5KSL6 1271 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ACSBG1Q96GR2 724 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 KPNA4O00629 521 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SKAP2O75563 359 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 EEF2P13639 858 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PDE1AP54750 535 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 DNAL1Q4LDG9 190 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SGO2Q562F6 1265 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 STK32CQ86UX6 486 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 BLOC1S5Q8TDH9 187 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ARMC1Q9NVT9 282 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TEX14Q8IWB6 1497 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 N4BP3O15049 544 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MSR1P21757 451 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 XKRXQ6PP77 449 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 DDX28Q9NUL7 540 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MAP3K15Q6ZN16 1313 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PAX3P23760 479 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 KPNA1P52294 538 aaPredicted RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SYCE2Q6PIF2 218 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 NANOGNBQ7Z5D8 188 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 FAM149B1Q96BN6 582 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 HAPLN3Q96S86 360 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM10Q9UDY6 481 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 C16orf96A6NNT2 1141 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 AKR1B10O60218 316 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SUCOQ9UBS9 1254 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MROH7Q68CQ1 1323 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 MAPK13O15264 365 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ALOX5P09917 674 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CENPUQ71F23 418 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 A0A1W2PQ27 194 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 A0A1W2PQ64 194 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 A0A1W2PQD8 194 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GOLGA8SH3BPF8 625 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CLUP10909 449 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ATP6V1C1P21283 382 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 AP1S2P56377 157 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 NLRP6P59044 892 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GIPC2Q8TF65 315 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 HERC2P3Q9BVR0 1158 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TIPINQ9BVW5 301 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SBNO1A3KN83 1393 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PEX14O75381 377 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 RAB25P57735 213 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SNX1Q13596 522 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 KIAA0408Q6ZU52 694 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GPT2Q8TD30 523 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CCT6BQ92526 530 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 HAUS2Q9NVX0 235 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CCDC59Q9P031 241 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 APOL3O95236 402 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 QARSP47897 775 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PMS1P54277 932 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 TTC23LQ6PF05 361 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC37BQ96QE4 947 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 GAL3ST1Q99999 423 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ABCA5Q8WWZ7 1642 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 IFNA16P05015 189 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 SERPINB3P29508 390 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 CARSP49589 748 aaKnown RBP4.04□□□□□ -1.76
SYNE2-202ENST00000344113 DLG4P78352 724 aa4.04□□□□□ -1.76
SYNE2-202ENST00000344113 ZNF304Q9HCX3 659 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms