RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SEPT10Q9P0V9 454 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 IQGAP3Q86VI3 1631 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 PP2D1A8MPX8 630 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 INO80B-WBP1J3KQ70 363 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 RWDD2BP57060 319 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 KCNH2Q12809 1159 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 NUGGCQ68CJ6 796 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 GSPT2Q8IYD1 628 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 SLC44A5Q8NCS7 719 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 INO80BQ9C086 356 aaPredicted RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 DNAJC12Q9UKB3 198 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 FRMD3A2A2Y4 597 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 A6NJR5 290 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 M0QZ92 97 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 ACSL3O95573 720 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 MAGEA9P43362 315 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 GRAPQ13588 217 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 RCN2Q14257 317 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 SH2D4BQ5SQS7 431 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 DNAJC24Q6P3W2 148 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 GRAPLQ8TC17 118 aaPredicted RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 USP42Q9H9J4 1324 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 LRRD1A4D1F6 860 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 TADA3O75528 432 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 CA4P22748 312 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 GUCY2CP25092 1073 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 DYNLT1P63172 113 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 FOXO4P98177 505 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 PIGOQ8TEQ8 1089 aa14.85□□□□□ -0.03
RTN4-202ENST00000337526 DNAJC17Q9NVM6 304 aaKnown RBP14.85□□□□□ -0.03
RTN4-202ENST00000337526 USP17L5A8MUK1 530 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 PODXLO00592 558 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 KRT1P04264 644 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CCZ1BP86790 482 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CCZ1P86791 482 aaPredicted RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 ADCY2Q08462 1091 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CEP120Q8N960 986 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 OSBPL9Q96SU4 736 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CALN1Q9BXU9 219 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 BASP1P80723 227 aaKnown RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 PPP1R2P3Q6NXS1 205 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 NFRKBQ6P4R8 1299 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 SCYL1Q96KG9 808 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CLTCL1P53675 1640 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 ESYT3A0FGR9 886 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 E9PMD0 336 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 MT-ND3P03897 115 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 GUCY1A2P33402 732 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 SERPINB6P35237 376 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 TFAMQ00059 246 aaKnown RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 DBN1Q16643 649 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 FAM160B1Q5W0V3 765 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 ATG9AQ7Z3C6 839 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 NCAPG2Q86XI2 1143 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 FOXP4Q8IVH2 680 aaPredicted RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 MED10Q9BTT4 135 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 GOLGA8IPA6NC78 632 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 GOLGA8JA6NMD2 632 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 CHGBP05060 677 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 USP14P54578 494 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 IGBP1P78318 339 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 ATP2C1P98194 919 aaPredicted RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 FAM182BQ5T319 152 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 TADA2BQ86TJ2 420 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 PDCD7Q8N8D1 485 aaKnown RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 FAM149B1Q96BN6 582 aa14.84□□□□□ -0.03
RTN4-202ENST00000337526 GPR101Q96P66 508 aaPredicted RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 NXF1Q9UBU9 619 aaKnown RBP14.84□□□□□ -0.03
RTN4-202ENST00000337526 SYNJ2BP-COX16A0A087WUM0 186 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L15C9J2P7 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L13C9JLJ4 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L11C9JVI0 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L18D6R9N7 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L22D6RA61 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L17D6RBQ6 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L19D6RCP7 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L20D6RJB6 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 MCF2LO15068 1137 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L24Q0WX57 530 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 USP17L6PQ6QN14 398 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 GUF1Q8N442 669 aaKnown RBP14.83□□□□□ -0.03
RTN4-202ENST00000337526 GDAP1Q8TB36 358 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 ELAC2Q9BQ52 826 aaKnown RBP14.83□□□□□ -0.03
RTN4-202ENST00000337526 COX16Q9P0S2 106 aa14.83□□□□□ -0.03
RTN4-202ENST00000337526 A0A1W2PQC6 194 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 MIF4GDA9UHW6 222 aaKnown RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 ZBTB5O15062 677 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 KCNJ6P48051 423 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 SFR1Q86XK3 245 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 CCHCR1Q8TD31 782 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 ZNF277Q9NRM2 450 aaPredicted RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 SETD1BQ9UPS6 1966 aaKnown RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 GARSP41250 739 aaKnown RBP14.83□□□□□ -0.04
RTN4-202ENST00000337526 ASPHQ12797 758 aa14.83□□□□□ -0.04
RTN4-202ENST00000337526 AP3B2Q13367 1082 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms