RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 SNHG28P0DPA3 235 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 MRPS25P82663 173 aaKnown RBP18.03■□□□□ 0.48
LCK-202ENST00000336890 ITGB3BPQ13352 177 aaPredicted RBP18.03■□□□□ 0.48
LCK-202ENST00000336890 GRAPQ13588 217 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 HLTFQ14527 1009 aaKnown RBP eCLIP18.03■□□□□ 0.48
LCK-202ENST00000336890 FAM153CQ494X1 144 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 FRMD5Q7Z6J6 570 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 SH2D3CQ8N5H7 860 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
LCK-202ENST00000336890 ZNF473Q8WTR7 871 aaKnown RBP18.03■□□□□ 0.48
LCK-202ENST00000336890 PIK3R5Q8WYR1 880 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 FAM163AQ96GL9 167 aaPredicted RBP18.03■□□□□ 0.48
LCK-202ENST00000336890 CABS1Q96KC9 395 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 SLITRK6Q9H5Y7 841 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 TMBIM4Q9HC24 238 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 FAM153AQ9UHL3 310 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 FBXL5Q9UKA1 691 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 SAMM50Q9Y512 469 aa18.03■□□□□ 0.48
LCK-202ENST00000336890 A0A0A6YYK5 440 aaPredicted RBP18.02■□□□□ 0.48
LCK-202ENST00000336890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.02■□□□□ 0.48
LCK-202ENST00000336890 PLSCR1O15162 318 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 RAD51CO43502 376 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 GUCY2FP51841 1108 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 NLRP14Q86W24 1093 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 SCFD2Q8WU76 684 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 SPAG5Q96R06 1193 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 ADAMTS1Q9UHI8 967 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 MYO3BQ8WXR4 1341 aa18.02■□□□□ 0.48
LCK-202ENST00000336890 KCNK3O14649 394 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 GFPT2O94808 682 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 TM4SF1P30408 202 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 PRKCIP41743 596 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 CLK2P49760 499 aaKnown RBP18.02■□□□□ 0.47
LCK-202ENST00000336890 ADAM9Q13443 819 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 CLUL1Q15846 466 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 PPP2R5EQ16537 467 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 SPDYCQ5MJ68 293 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 CEP85LQ5SZL2 805 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 KCNK18Q7Z418 384 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 FMNL3Q8IVF7 1028 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 TACO1Q9BSH4 297 aaKnown RBP18.02■□□□□ 0.47
LCK-202ENST00000336890 KCTD10Q9H3F6 313 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 EMILIN3Q9NT22 766 aa18.02■□□□□ 0.47
LCK-202ENST00000336890 ESYT3A0FGR9 886 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 FRMD3A2A2Y4 597 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 HNRNPH1P31943 449 aaKnown RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 IRX3P78415 501 aaPredicted RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 HERC4Q5GLZ8 1057 aaPredicted RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 AGBL2Q5U5Z8 902 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 TTC19Q6DKK2 380 aaPredicted RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 CCDC26Q8TAB7 109 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 MYCBPAPQ8TBZ2 947 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 TBC1D22AQ8WUA7 517 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.01■□□□□ 0.47
LCK-202ENST00000336890 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 ACTR5Q9H9F9 607 aaPredicted RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 GEMIN8Q9NWZ8 242 aaKnown RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 MTMR4Q9NYA4 1195 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 PCDHA2Q9Y5H9 948 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 CAPN7Q9Y6W3 813 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 PLA2G4BP0C869 781 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 NPEPPSP55786 919 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 KCNH2Q12809 1159 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 TMC4Q7Z404 712 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 GPBP1Q86WP2 473 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 SLFN12Q8IYM2 578 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 P3H4Q92791 437 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 CCT8L2Q96SF2 557 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 NUDT12Q9BQG2 462 aa18.01■□□□□ 0.47
LCK-202ENST00000336890 METTL14Q9HCE5 456 aaKnown RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 ARMCX3Q9UH62 379 aaPredicted RBP18.01■□□□□ 0.47
LCK-202ENST00000336890 AFPP02771 609 aaKnown RBP18■□□□□ 0.47
LCK-202ENST00000336890 SSBP05455 408 aaKnown RBP eCLIP18■□□□□ 0.47
LCK-202ENST00000336890 KRT18P05783 430 aaKnown RBP18■□□□□ 0.47
LCK-202ENST00000336890 RXRBP28702 533 aa18■□□□□ 0.47
LCK-202ENST00000336890 GUCY1A3Q02108 690 aa18■□□□□ 0.47
LCK-202ENST00000336890 NFIXQ14938 502 aa18■□□□□ 0.47
LCK-202ENST00000336890 KAT2BQ92831 832 aa18■□□□□ 0.47
LCK-202ENST00000336890 COA7Q96BR5 231 aa18■□□□□ 0.47
LCK-202ENST00000336890 HDAC9Q9UKV0 1011 aa18■□□□□ 0.47
LCK-202ENST00000336890 TRAF3IP3Q9Y228 551 aa18■□□□□ 0.47
LCK-202ENST00000336890 DIS3Q9Y2L1 958 aaKnown RBP18■□□□□ 0.47
LCK-202ENST00000336890 GOLGA6L7A0A1B0GV03 622 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 ZSCAN5CA6NGD5 496 aaPredicted RBP17.99■□□□□ 0.47
LCK-202ENST00000336890 BHMG1C9JSJ3 638 aaPredicted RBP17.99■□□□□ 0.47
LCK-202ENST00000336890 CALUO43852 315 aaPredicted RBP17.99■□□□□ 0.47
LCK-202ENST00000336890 DDR1Q08345 913 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 MOXD1Q6UVY6 613 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 RPAINQ86UA6 219 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 KLHL7Q8IXQ5 586 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 GLIS3Q8NEA6 775 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 SCFD1Q8WVM8 642 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 HAS1Q92839 578 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 A1CFQ9NQ94 594 aaKnown RBP17.99■□□□□ 0.47
LCK-202ENST00000336890 SUCLA2Q9P2R7 463 aaPredicted RBP17.99■□□□□ 0.47
LCK-202ENST00000336890 GAKO14976 1311 aa17.99■□□□□ 0.47
LCK-202ENST00000336890 SLC16A3O15427 465 aaKnown RBP17.99■□□□□ 0.47
LCK-202ENST00000336890 CEP104O60308 925 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms