RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RPA1P27694 616 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 HOXD13P35453 343 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
LIMK1-201ENST00000336180 MRPS25P82663 173 aaKnown RBP13.91□□□□□ -0.18
LIMK1-201ENST00000336180 CLEC4DQ8WXI8 215 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 LXNQ9BS40 222 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 GPRC5CQ9NQ84 441 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 KCNH7Q9NS40 1196 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 PCDHA2Q9Y5H9 948 aa13.91□□□□□ -0.18
LIMK1-201ENST00000336180 LRRC53A6NM62 1247 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 HERVK_113P62684 666 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 EHHADHQ08426 723 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 ORC2Q13416 577 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 PRPF38AQ8NAV1 312 aaKnown RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 FAM84AQ96KN4 292 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 CAPZA3Q96KX2 299 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 MBOAT7Q96N66 472 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 GLT8D2Q9H1C3 349 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 PTGER2P43116 358 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 PSEN1P49768 467 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 CYP2J2P51589 502 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 POLR2FP61218 127 aaKnown RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 MRPS9P82933 396 aaKnown RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 BAATQ14032 418 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 RINT1Q6NUQ1 792 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 CACNA2D4Q7Z3S7 1137 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 NHEJ1Q9H9Q4 299 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 USP20Q9Y2K6 914 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 KIF5CO60282 957 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 PSMD10O75832 226 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 FAM13AO94988 1023 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 ARHGAP25P42331 645 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 ITGB3BPQ13352 177 aaPredicted RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 TDRD12Q587J7 1177 aaKnown RBP13.9□□□□□ -0.18
LIMK1-201ENST00000336180 CAPN11Q9UMQ6 739 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 COL4A3BPQ9Y5P4 624 aa13.9□□□□□ -0.18
LIMK1-201ENST00000336180 ITIH6Q6UXX5 1313 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 ADM5C9JUS6 153 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 USO1O60763 962 aaKnown RBP13.89□□□□□ -0.19
LIMK1-201ENST00000336180 SEC31AO94979 1220 aaKnown RBP13.89□□□□□ -0.19
LIMK1-201ENST00000336180 KCNMA1Q12791 1236 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 TMTC1Q8IUR5 882 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 FAM114A1Q8IWE2 563 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 SYT2Q8N9I0 419 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-201ENST00000336180 R3HDMLQ9H3Y0 253 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 PCIF1Q9H4Z3 704 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 ZNF263O14978 683 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 ICAM1P05362 532 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 MMP14P50281 582 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 NPEPPSP55786 919 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 FKBP3Q00688 224 aaKnown RBP13.89□□□□□ -0.19
LIMK1-201ENST00000336180 UGCGQ16739 394 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 ZSWIM2Q8NEG5 633 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 SYTL5Q8TDW5 730 aaPredicted RBP13.89□□□□□ -0.19
LIMK1-201ENST00000336180 FAM20AQ96MK3 541 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 KIFC3Q9BVG8 833 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 PICK1Q9NRD5 415 aa13.89□□□□□ -0.19
LIMK1-201ENST00000336180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.89□□□□□ -0.19
LIMK1-201ENST00000336180 SLC9A1P19634 815 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 FSTL1Q12841 308 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 TNFAIP1Q13829 316 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 MAN2A1Q16706 1144 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 SNRNP48Q6IEG0 339 aaKnown RBP13.88□□□□□ -0.19
LIMK1-201ENST00000336180 FAM160B2Q86V87 743 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 RMDN3Q96TC7 470 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 KCTD10Q9H3F6 313 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 MLXIPQ9HAP2 919 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 CCP110O43303 1012 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 TBC1D12O60347 775 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 LRRN2O75325 713 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 CIITAP33076 1130 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 EIF4A3P38919 411 aaKnown RBP13.88□□□□□ -0.19
LIMK1-201ENST00000336180 ZNF280AP59817 542 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-201ENST00000336180 PPP2R3AQ06190 1150 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 GFPT1Q06210 699 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-201ENST00000336180 MIER3Q7Z3K6 550 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 MTMR14Q8NCE2 650 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 FBXO41Q8TF61 875 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 ANKRD7Q92527 254 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 HSD17B14Q9BPX1 270 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 AKAP3O75969 853 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 KIF20AO95235 890 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 RAPGEF1Q13905 1077 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 ZCWPW2Q504Y3 356 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 HYIQ5T013 277 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 EEPD1Q7L9B9 569 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 ERO1AQ96HE7 468 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 TTYH3Q9C0H2 523 aa13.88□□□□□ -0.19
LIMK1-201ENST00000336180 PLEKHA4Q9H4M7 779 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms