RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZRANB2O95218 330 aaKnown RBP eCLIP19.19■□□□□ 0.66
DDX28-201ENST00000332395 MYBP10242 640 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 HOXD13P35453 343 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 EIF4A3P38919 411 aaKnown RBP19.19■□□□□ 0.66
DDX28-201ENST00000332395 PTGER2P43116 358 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 KIF11P52732 1056 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 FAM193AP78312 1265 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 KIF5AQ12840 1032 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 RASA3Q14644 834 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 ARHGAP27Q6ZUM4 889 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 PIGOQ8TEQ8 1089 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 DYDC2Q96IM9 177 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 DEF6Q9H4E7 631 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 CEP72Q9P209 647 aa19.19■□□□□ 0.66
DDX28-201ENST00000332395 RBBP6Q7Z6E9 1792 aaKnown RBP19.18■□□□□ 0.66
DDX28-201ENST00000332395 ENC1O14682 589 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 PRELPP51888 382 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 BMS1Q14692 1282 aaKnown RBP19.18■□□□□ 0.66
DDX28-201ENST00000332395 RINT1Q6NUQ1 792 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 TRAPPC11Q7Z392 1133 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 PURBQ96QR8 312 aaKnown RBP19.18■□□□□ 0.66
DDX28-201ENST00000332395 TSGA10Q9BZW7 698 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 FHOD1Q9Y613 1164 aa19.18■□□□□ 0.66
DDX28-201ENST00000332395 CCDC66A2RUB6 948 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 PHF20L1A8MW92 1017 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 NOL4O94818 638 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 PRPF6O94906 941 aaKnown RBP19.17■□□□□ 0.66
DDX28-201ENST00000332395 LCA5LO95447 670 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 INPP5BP32019 993 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 SETQ01105 290 aaPredicted RBP19.17■□□□□ 0.66
DDX28-201ENST00000332395 BMT2Q1RMZ1 405 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 JDP2Q8WYK2 163 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 ZFP91Q96JP5 570 aaPredicted RBP19.17■□□□□ 0.66
DDX28-201ENST00000332395 LSM14BQ9BX40 385 aaKnown RBP19.17■□□□□ 0.66
DDX28-201ENST00000332395 IFIH1Q9BYX4 1025 aaKnown RBP19.17■□□□□ 0.66
DDX28-201ENST00000332395 TAOK3Q9H2K8 898 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 CCPG1Q9ULG6 757 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 DUSP10Q9Y6W6 482 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 PDXKO00764 312 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 ATP1A1P05023 1023 aaKnown RBP19.17■□□□□ 0.66
DDX28-201ENST00000332395 ICAM1P05362 532 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 TGFB2P61812 414 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 ZNF577Q9BSK1 485 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 DEFB129Q9H1M3 183 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 POLD4Q9HCU8 107 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 NLRC4Q9NPP4 1024 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 PCDHA13Q9Y5I0 950 aa19.17■□□□□ 0.66
DDX28-201ENST00000332395 MACROD2A1Z1Q3 448 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 CTAGE15A4D2H0 777 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 AKR1B10O60218 316 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 CTAGE8P0CG41 777 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 ARP10275 920 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 TUBB4BP68371 445 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 CTAGE6Q86UF2 777 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 GPIHBP1Q8IV16 184 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 CTAGE4Q8IX94 777 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 CRACR2AQ9BSW2 395 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 WDR11Q9BZH6 1224 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 NUCKS1Q9H1E3 243 aaKnown RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 BCAS3Q9H6U6 928 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 OLFML3Q9NRN5 406 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 HDAC6Q9UBN7 1215 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 ZNF536O15090 1300 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 CALUO43852 315 aaPredicted RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 SEC31AO94979 1220 aaKnown RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 GCNT3O95395 438 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 PNMA6AP0CW24 399 aaPredicted RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 GAP43P17677 238 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 EPS15P42566 896 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 HSD17B4P51659 736 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 KCNH2Q12809 1159 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 PAPD7Q5XG87 772 aaKnown RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 CC2D1AQ6P1N0 951 aaPredicted RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 SECISBP2LQ93073 1101 aaKnown RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 ANKZF1Q9H8Y5 726 aa19.16■□□□□ 0.66
DDX28-201ENST00000332395 TYW1Q9NV66 732 aaKnown RBP19.16■□□□□ 0.66
DDX28-201ENST00000332395 USO1O60763 962 aaKnown RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 EGFRP00533 1210 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 POLR2FP61218 127 aaKnown RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 HGSNATQ68CP4 663 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 C1orf186Q6ZWK4 172 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 FRMD5Q7Z6J6 570 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 SYN2Q92777 582 aaPredicted RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 TEPSINQ96N21 525 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 UNC45AQ9H3U1 944 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 ARMCX3Q9UH62 379 aaPredicted RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 SAR1BQ9Y6B6 198 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 ASTN1O14525 1302 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 FER1L6Q2WGJ9 1857 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 SSU72P8A0A1W2PR75 194 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 SFI1A8K8P3 1242 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 ZBTB39O15060 712 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 WDR46O15213 610 aaKnown RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 MUTP22033 750 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 MAPK8IP2Q13387 824 aaPredicted RBP19.15■□□□□ 0.66
DDX28-201ENST00000332395 TNFAIP1Q13829 316 aa19.15■□□□□ 0.66
DDX28-201ENST00000332395 ASTE1Q2TB18 679 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms