RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 GLYCTKQ8IVS8 523 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 MARCH10Q8NA82 808 aaPredicted RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 COA7Q96BR5 231 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 MCM8Q9UJA3 840 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 POM121CA8CG34 1229 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 NOL4O94818 638 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 TNFRSF8P28908 595 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 HSPA9P38646 679 aaKnown RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 EIF6P56537 245 aaKnown RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 DDR1Q08345 913 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 NBPF9Q3BBW0 867 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 DAAM2Q86T65 1068 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 TBC1D1Q86TI0 1168 aaPredicted RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 MYOCDQ8IZQ8 938 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 RUBCNQ92622 972 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 LRRC45Q96CN5 670 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 THOC1Q96FV9 657 aaKnown RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 PIGSQ96S52 555 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 NOC2LQ9Y3T9 749 aaKnown RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 COL4A3BPQ9Y5P4 624 aa8.62□□□□□ -1.03
VMA21-201ENST00000330374 FRMPD2Q68DX3 1309 aaPredicted RBP8.62□□□□□ -1.03
VMA21-201ENST00000330374 TRPM3Q9HCF6 1732 aaPredicted RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 SLC37A4O43826 429 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 ORC4O43929 436 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 LCA5LO95447 670 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 KRT18P05783 430 aaKnown RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 SLCO1A2P46721 670 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 SLC18A3Q16572 532 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 ACCSLQ4AC99 568 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 DCAF17Q5H9S7 520 aaPredicted RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 LRRC55Q6ZSA7 311 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 UNC13DQ70J99 1090 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 MAPKAPK5Q8IW41 473 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 ANKS1AQ92625 1134 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 TIAM2Q8IVF5 1701 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 COL1A1P02452 1464 aaPredicted RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 TRAPPC3O43617 180 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 PTK2Q05397 1052 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 PEX26Q7Z412 305 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 TGFBRAP1Q8WUH2 860 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 SGSM3Q96HU1 749 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 PNMA5Q96PV4 448 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 TMEM47Q9BQJ4 181 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 ISCUQ9H1K1 167 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 CUEDC2Q9H467 287 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 C6orf50Q9HD87 102 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 PLCB1Q9NQ66 1216 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 CEP72Q9P209 647 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 SEC63Q9UGP8 760 aaKnown RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 DUOX1Q9NRD9 1551 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 KIF4AO95239 1232 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 VIMP08670 466 aaKnown RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 SLC9A1P19634 815 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 KCNQ4P56696 695 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 LLGL1Q15334 1064 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 C6orf89Q6UWU4 347 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 RUFY4Q6ZNE9 571 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 METTL13Q8N6R0 699 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 CELF1Q92879 486 aaKnown RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 SEPT11Q9NVA2 429 aaKnown RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 L3MBTL1Q9Y468 752 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 SSU72P8A0A1W2PR75 194 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 BUB1BO60566 1050 aaPredicted RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 KRT79Q5XKE5 535 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 YTHDF3Q7Z739 585 aaKnown RBP8.61□□□□□ -1.03
VMA21-201ENST00000330374 SLC51AQ86UW1 340 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 MGARPQ8TDB4 240 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 AK8Q96MA6 479 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 CCSER2Q9H7U1 834 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 RNF14Q9UBS8 474 aa8.61□□□□□ -1.03
VMA21-201ENST00000330374 PARP4Q9UKK3 1724 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 SRCAPQ6ZRS2 3230 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 M0R2N6 131 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ADAMTS2O95450 1211 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ABCB4P21439 1286 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 ECHS1P30084 290 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 MYO1EQ12965 1108 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 GRM4Q14833 912 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 TMEM266Q2M3C6 531 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 HERC4Q5GLZ8 1057 aaPredicted RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 KRT25Q7Z3Z0 450 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 CD302Q8IX05 232 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 REXO1Q8N1G1 1221 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 GUF1Q8N442 669 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 MREGQ8N565 214 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 PANK4Q9NVE7 773 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 SLC12A6Q9UHW9 1150 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 PGRMC1O00264 195 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 CAND2O75155 1236 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 RFC5P40937 340 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 IGBP1P78318 339 aa8.6□□□□□ -1.03
VMA21-201ENST00000330374 FKBP3Q00688 224 aaKnown RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 ZNF211Q13398 564 aaPredicted RBP8.6□□□□□ -1.03
VMA21-201ENST00000330374 ECM1Q16610 540 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms