RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 SH2B2O14492 632 aaPredicted RBP8.17□□□□□ -1.1
TRIM49-201ENST00000329758 ZNF185O15231 689 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 GUCY1A2P33402 732 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 CYLC1P35663 651 aaPredicted RBP8.17□□□□□ -1.1
TRIM49-201ENST00000329758 SPAG1Q07617 926 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 UBE3CQ15386 1083 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 ERMARDQ5T6L9 678 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 PIGWQ7Z7B1 504 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
TRIM49-201ENST00000329758 ZNF384Q8TF68 577 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 PTPRN2Q92932 1015 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
TRIM49-201ENST00000329758 RAB3IPQ96QF0 476 aaPredicted RBP8.17□□□□□ -1.1
TRIM49-201ENST00000329758 NUP88Q99567 741 aaPredicted RBP8.17□□□□□ -1.1
TRIM49-201ENST00000329758 MTRQ99707 1265 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 ARHGEF3Q9NR81 526 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 DLGAP2Q9P1A6 1054 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 SAMD15Q9P1V8 674 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 PDP2Q9P2J9 529 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 RNF14Q9UBS8 474 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 MINPP1Q9UNW1 487 aa8.17□□□□□ -1.1
TRIM49-201ENST00000329758 MROH7Q68CQ1 1323 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 TNRC6CQ9HCJ0 1690 aaKnown RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 IGF2BP3O00425 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 RANBP6O60518 1105 aaKnown RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 RARAP10276 462 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 NAT1P18440 290 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 RFC5P40937 340 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 SKIV2L2P42285 1042 aaKnown RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 PAFAH1B1P43034 410 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 KCNJ2P63252 427 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 MTMR3Q13615 1198 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 LONRF3Q496Y0 759 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 TMEM67Q5HYA8 995 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 GALNT17Q6IS24 598 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 POTEHQ6S545 545 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 CEP128Q6ZU80 1094 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 STKLD1Q8NE28 680 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 IGDCC4Q8TDY8 1250 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 SH3TC2Q8TF17 1288 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 RSPH1Q8WYR4 309 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 KCNN1Q92952 543 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 LRRC45Q96CN5 670 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 ZNF512BQ96KM6 892 aaPredicted RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 XPO6Q96QU8 1125 aaKnown RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 BRD8Q9H0E9 1235 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 CARD9Q9H257 536 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 RNPEPL1Q9HAU8 725 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 ZNHIT6Q9NWK9 470 aaKnown RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 CCNL1Q9UK58 526 aaPredicted RBP8.16□□□□□ -1.1
TRIM49-201ENST00000329758 ATP8A1Q9Y2Q0 1164 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 TMED5Q9Y3A6 229 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 DOCK2Q92608 1830 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 MYH2Q9UKX2 1941 aa8.16□□□□□ -1.1
TRIM49-201ENST00000329758 UTRNP46939 3433 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 PFDN1O60925 122 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 TACC1O75410 805 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 MYBL1P10243 752 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 BCRP11274 1271 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 HARSP12081 509 aaKnown RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 RXRBP28702 533 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 MARCKSP29966 332 aaPredicted RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 GSTT1P30711 240 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 KRT9P35527 623 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 PEX5P50542 639 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 METAP2P50579 478 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 SLC7A5Q01650 507 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 KIF23Q02241 960 aaPredicted RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 TMEM62Q0P6H9 643 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 GALNTL6Q49A17 601 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 APOA5Q6Q788 366 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 VPS37DQ86XT2 251 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 SLF2Q8IX21 1173 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 ERMNQ8TAM6 284 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 PRCCQ92733 491 aaPredicted RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 KLHL29Q96CT2 875 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 DDX27Q96GQ7 796 aaKnown RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 MED15Q96RN5 788 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 HAPLN3Q96S86 360 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 SMC6Q96SB8 1091 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 DNAJC7Q99615 494 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 CORO1BQ9BR76 489 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 MIS12Q9H081 205 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 ECT2Q9H8V3 914 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 LY9Q9HBG7 655 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 RMND1Q9NWS8 449 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 LIMA1Q9UHB6 759 aaKnown RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 KCNH3Q9ULD8 1083 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 NFU1Q9UMS0 254 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 ANGEL1Q9UNK9 670 aaKnown RBP8.15□□□□□ -1.1
TRIM49-201ENST00000329758 AGAP1Q9UPQ3 857 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 LRCH1Q9Y2L9 728 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 COMMD3-BMI1R4GMX3 469 aa8.15□□□□□ -1.1
TRIM49-201ENST00000329758 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms