RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TMEM39AQ9NV64 488 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 MAPK8IP1Q9UQF2 711 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 ZNF804BA4D1E1 1349 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 PTPRFP10586 1907 aa5.87□□□□□ -1.47
CKS1B-201ENST00000308987 COL1A1P02452 1464 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 MYO3BQ8WXR4 1341 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CLRN2A0PK11 232 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 H3BS24 57 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 TAF5LO75529 589 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 USP2O75604 605 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 EN2P19622 333 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 ARNTP27540 789 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 ERVFC1P60507 584 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CHRNDQ07001 517 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CRHR2Q13324 411 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 GRM2Q14416 872 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 RABEP1Q15276 862 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 INTS3Q68E01 1043 aaKnown RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 ARMC9Q7Z3E5 817 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 APOBEC3FQ8IUX4 373 aaKnown RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 SULF2Q8IWU5 870 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 RPAP2Q8IXW5 612 aaPredicted RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CD99L2Q8TCZ2 262 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 GPBAR1Q8TDU6 330 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 EPS8L3Q8TE67 593 aaKnown RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 KCNC2Q96PR1 638 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CDC5LQ99459 802 aaKnown RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 KIF2CQ99661 725 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 DCTPP1Q9H773 170 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 GRPEL1Q9HAV7 217 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CD209Q9NNX6 404 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 SLAMF8Q9P0V8 285 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 EGFL7Q9UHF1 273 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 TRIM17Q9Y577 477 aa5.86□□□□□ -1.47
CKS1B-201ENST00000308987 CDH23Q9H251 3354 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 PTPRCP08575 1304 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 F8W031 263 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 FXR1P51114 621 aaKnown RBP eCLIP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 NUCB2P80303 420 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 FOXO4P98177 505 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 SREBF2Q12772 1141 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 GCKRQ14397 625 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 EPHA10Q5JZY3 1008 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 ANKRD45Q5TZF3 282 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 CCDC30Q5VVM6 783 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 C15orf52Q6ZUT6 534 aaKnown RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 BAHD1Q8TBE0 780 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 MYLIPQ8WY64 445 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 TNPO1Q92973 898 aaKnown RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 ARMC5Q96C12 935 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 TEPSINQ96N21 525 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 LNPKQ9C0E8 428 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 RRAGDQ9NQL2 400 aaPredicted RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 PTPN22Q9Y2R2 807 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 PHIPQ8WWQ0 1821 aa5.85□□□□□ -1.47
CKS1B-201ENST00000308987 SPTBN5Q9NRC6 3674 aaKnown RBP5.85□□□□□ -1.47
CKS1B-201ENST00000308987 DNAJC25-GNG10A0A024R161 153 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 MANSC4A6NHS7 340 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-201ENST00000308987 EPB41L2O43491 1005 aaKnown RBP5.84□□□□□ -1.47
CKS1B-201ENST00000308987 DDX58O95786 925 aaKnown RBP5.84□□□□□ -1.47
CKS1B-201ENST00000308987 ZBTB48P10074 688 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-201ENST00000308987 IL1R1P14778 569 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 NF2P35240 595 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 RASA3Q14644 834 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 DLGAP5Q15398 846 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 KLHL40Q2TBA0 621 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 TWISTNBQ3B726 338 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-201ENST00000308987 HS1BP3Q53T59 392 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 SIRT2Q8IXJ6 389 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 ANKRD44Q8N8A2 993 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 BRI3BPQ8WY22 251 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 PPP1R9BQ96SB3 815 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 DNAJC25Q9H1X3 360 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 ST14Q9Y5Y6 855 aa5.84□□□□□ -1.47
CKS1B-201ENST00000308987 MYH2Q9UKX2 1941 aa5.84□□□□□ -1.48
CKS1B-201ENST00000308987 DCDC2CA8MYV0 355 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 F6X3S4 739 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 GPR182O15218 404 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 SLITRK5O94991 958 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 HSP90AA1P07900 732 aaKnown RBP5.83□□□□□ -1.48
CKS1B-201ENST00000308987 CTGFP29279 349 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
CKS1B-201ENST00000308987 MMP14P50281 582 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 TERF1P54274 439 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 INHBEP58166 350 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 DLG4P78352 724 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 RING1Q06587 406 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 CCDC173Q0VFZ6 552 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 RALGPS1Q5JS13 557 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 TTC22Q5TAA0 569 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 CASC1Q6TDU7 716 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 ARMCX6Q7L4S7 300 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 C12orf40Q86WS4 652 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 MFSD4AQ8N468 514 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 UBE2Q2Q8WVN8 375 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
CKS1B-201ENST00000308987 KAZALD1Q96I82 304 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms