RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 B4GALNT2Q8NHY0 566 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 USP6NLQ92738 828 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 DSCC1Q9BVC3 393 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 NFKBIL1Q9UBC1 381 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 PPARGC1AQ9UBK2 798 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 A0A087WUV0 522 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 PRR23D1E9PI22 279 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 PRR23D2P0DMB1 279 aaPredicted RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 CASP14P31944 242 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 MAP3K10Q02779 954 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 MORF4L2Q15014 288 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 ACAD11Q709F0 780 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 CENPUQ71F23 418 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 GTSE1Q9NYZ3 720 aa11.16□□□□□ -0.62
CLIP1-201ENST00000302528 NOVA2Q9UNW9 492 aaKnown RBP11.16□□□□□ -0.62
CLIP1-201ENST00000302528 A0A1B0GW55 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DAB1O75553 588 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4L2P0CJ85 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4L3P0CJ86 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4L4P0CJ87 422 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4L5P0CJ88 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4L6P0CJ89 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4L7P0CJ90 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 CIITAP33076 1130 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 TMPRSS15P98073 1019 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 NNTQ13423 1086 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 FASTKD5Q7L8L6 764 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 LRRC8AQ8IWT6 810 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 PPHLN1Q8NEY8 458 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DUX4Q9UBX2 424 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 KRT87PA6NCN2 255 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 FOSP01100 380 aaPredicted RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 TCF3P15923 654 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 TRPC1P48995 793 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 STAT2P52630 851 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 SLFN13Q68D06 897 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 BZW1Q7L1Q6 419 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 APOBEC2Q9Y235 224 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 A0A0G2JND7 137 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DNAJC6O75061 913 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 ALS2CLQ60I27 953 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 TTC23LQ6PF05 361 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 CDCA7Q9BWT1 371 aaPredicted RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 DBNLQ9UJU6 430 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 GAP43P17677 238 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 TTC17Q96AE7 1141 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 EEF2KMTQ96G04 330 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 HEXIM2Q96MH2 286 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 SMYD3Q9H7B4 428 aa11.15□□□□□ -0.62
CLIP1-201ENST00000302528 MRPL40Q9NQ50 206 aaKnown RBP11.15□□□□□ -0.62
CLIP1-201ENST00000302528 GYG2O15488 501 aa11.15□□□□□ -0.63
CLIP1-201ENST00000302528 DCTN3O75935 186 aa11.15□□□□□ -0.63
CLIP1-201ENST00000302528 SEC31AO94979 1220 aaKnown RBP11.15□□□□□ -0.63
CLIP1-201ENST00000302528 PSMC1P62191 440 aaKnown RBP11.15□□□□□ -0.63
CLIP1-201ENST00000302528 WASHC5Q12768 1159 aa11.15□□□□□ -0.63
CLIP1-201ENST00000302528 FANCBQ8NB91 859 aa11.15□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF577Q9BSK1 485 aa11.15□□□□□ -0.63
CLIP1-201ENST00000302528 CD109Q6YHK3 1445 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 KRT37O76014 449 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 CD58P19256 250 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 CMA1P23946 247 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 MED21Q13503 144 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 TBC1D1Q86TI0 1168 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-201ENST00000302528 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
CLIP1-201ENST00000302528 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 MAGEF1Q9HAY2 307 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 CASS4Q9NQ75 786 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 PCDHA1Q9Y5I3 950 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 DSTYKQ6XUX3 929 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 WDR48Q8TAF3 677 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 SH3KBP1Q96B97 665 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 PCIF1Q9H4Z3 704 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 NOP53Q9NZM5 478 aaKnown RBP11.14□□□□□ -0.63
CLIP1-201ENST00000302528 COPEO14579 308 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 RGS9BPQ6ZS82 235 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 PDCD6IPQ8WUM4 868 aaKnown RBP11.14□□□□□ -0.63
CLIP1-201ENST00000302528 FAF2Q96CS3 445 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 PBKQ96KB5 322 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 ATG3Q9NT62 314 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 ZNF229Q9UJW7 825 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 KPNA7A9QM74 516 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 ORC4O43929 436 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 NUGGCQ68CJ6 796 aa11.14□□□□□ -0.63
CLIP1-201ENST00000302528 FTCDO95954 541 aa11.13□□□□□ -0.63
CLIP1-201ENST00000302528 SCNN1DP51172 638 aa11.13□□□□□ -0.63
CLIP1-201ENST00000302528 RINLQ6ZS11 566 aa11.13□□□□□ -0.63
CLIP1-201ENST00000302528 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
CLIP1-201ENST00000302528 H0Y3Z8 333 aa11.13□□□□□ -0.63
CLIP1-201ENST00000302528 GFPT2O94808 682 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms