RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SEMA6BQ9H3T3 888 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 USP21Q9UK80 565 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 FBXL5Q9UKA1 691 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 MYO1FO00160 1098 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 BCRP11274 1271 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 SESN3P58005 492 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 IL17AQ16552 155 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 SYCE1Q8N0S2 351 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 VGLL2Q8N8G2 317 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 CSRNP1Q96S65 589 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 CCSER1Q9C0I3 900 aa14.48□□□□□ -0.09
CASC4-201ENST00000299957 TTI1O43156 1089 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 SART1O43290 800 aaKnown RBP14.47□□□□□ -0.09
CASC4-201ENST00000299957 GH2P01242 217 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 ABCB5Q2M3G0 1257 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 ASPRV1Q53RT3 343 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 MTMR8Q96EF0 704 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 FMO2Q99518 471 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 SH2D4AQ9H788 454 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 STX2P32856 288 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 GPSM2P81274 684 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 MXRA7P84157 204 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 ZC2HC1CQ53FD0 456 aaPredicted RBP14.47□□□□□ -0.09
CASC4-201ENST00000299957 XKR9Q5GH70 373 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 PDXDC1Q6P996 788 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 INTS5Q6P9B9 1019 aaKnown RBP14.47□□□□□ -0.09
CASC4-201ENST00000299957 TRAPPC11Q7Z392 1133 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 VPS37BQ9H9H4 285 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 TMEM51Q9NW97 253 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 DNAJC12Q9UKB3 198 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 PNMA6FA0A0J9YX94 578 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 ANO9A1A5B4 782 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 PHF20L1A8MW92 1017 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 RAD51CO43502 376 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 ICE2Q659A1 982 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 MIER3Q7Z3K6 550 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 GUF1Q8N442 669 aaKnown RBP14.47□□□□□ -0.09
CASC4-201ENST00000299957 MDM1Q8TC05 714 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 MICAL1Q8TDZ2 1067 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 NAP1L3Q99457 506 aaPredicted RBP14.47□□□□□ -0.09
CASC4-201ENST00000299957 MTRQ99707 1265 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 RAB17Q9H0T7 212 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 IL17RBQ9NRM6 502 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 LEMD3Q9Y2U8 911 aa14.47□□□□□ -0.09
CASC4-201ENST00000299957 CYTH3O43739 400 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 TRIM37O94972 964 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 CD19P15391 556 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 INTS8Q75QN2 995 aaKnown RBP14.46□□□□□ -0.09
CASC4-201ENST00000299957 BANK1Q8NDB2 785 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 HAUS1Q96CS2 278 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 MAD2L2Q9UI95 211 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 WDR91A4D1P6 747 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 PSMD14O00487 310 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 FANCGO15287 622 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 ATP2B4P23634 1241 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 ZNF131P52739 623 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 MYL7Q01449 175 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 GRAPQ13588 217 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 CCDC63Q8NA47 563 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 LINC00116Q8NCU8 138 aa14.46□□□□□ -0.09
CASC4-201ENST00000299957 GRAPLQ8TC17 118 aaPredicted RBP14.46□□□□□ -0.09
CASC4-201ENST00000299957 TDRD3Q9H7E2 651 aaKnown RBP14.46□□□□□ -0.09
CASC4-201ENST00000299957 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.46□□□□□ -0.09
CASC4-201ENST00000299957 RSPH10B2B2RC85 870 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 NR3C1P04150 777 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 RSPH10BP0C881 870 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 ARHGAP4P98171 946 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 FAM47EQ6ZV65 393 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 ZNF653Q96CK0 615 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 CDCA7Q9BWT1 371 aaPredicted RBP14.46□□□□□ -0.1
CASC4-201ENST00000299957 JCADQ9P266 1359 aa14.46□□□□□ -0.1
CASC4-201ENST00000299957 GLI1P08151 1106 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 KCNB1Q14721 858 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 PPP1R14CQ8TAE6 165 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 ZNF512BQ96KM6 892 aaPredicted RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 SPATA31D1Q6ZQQ2 1576 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 ATMINO43313 823 aaPredicted RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 THAP12O43422 761 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 RAD17O75943 681 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 FAM153BP0C7A2 387 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 PTK2Q05397 1052 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 FAM153CQ494X1 144 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 GLG1Q92896 1179 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 RNPC3Q96LT9 517 aaKnown RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 MAGEF1Q9HAY2 307 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 CEP72Q9P209 647 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 FAM153AQ9UHL3 310 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 MYL1P05976 194 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 MYBP10242 640 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 KCNJ1P48048 391 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 GPATCH4Q5T3I0 446 aaKnown RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 KCNK18Q7Z418 384 aa14.45□□□□□ -0.1
CASC4-201ENST00000299957 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 IQCGQ9H095 443 aaKnown RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 NOC2LQ9Y3T9 749 aaKnown RBP14.45□□□□□ -0.1
CASC4-201ENST00000299957 PDS5AQ29RF7 1337 aaKnown RBP14.44□□□□□ -0.1
CASC4-201ENST00000299957 ITIH6Q6UXX5 1313 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms