RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SLC9A1P19634 815 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 INPP5BP32019 993 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 CASP4P49662 377 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 KIF11P52732 1056 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 HSP90B2PQ58FF3 399 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 SFMBT2Q5VUG0 894 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 EEPD1Q7L9B9 569 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 GUF1Q8N442 669 aaKnown RBP10.24□□□□□ -0.77
PRDM9-201ENST00000296682 CEP112Q8N8E3 955 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 CCDC127Q96BQ5 260 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 RUSC1Q9BVN2 902 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 RABEP2Q9H5N1 569 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 CAPN11Q9UMQ6 739 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 MRFAP1Q9Y605 127 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 SCN9AQ15858 1988 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 KDM3AQ9Y4C1 1321 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 PARP14Q460N5 1801 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 PVALEFA0A1B0GWK0 134 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 GOLGA8IPA6NC78 632 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 GOLGA8JA6NMD2 632 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 hCG_1984214I3L0E3 225 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 LRRN2O75325 713 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 XRCC5P13010 732 aaKnown RBP10.24□□□□□ -0.77
PRDM9-201ENST00000296682 C2orf54Q08AI8 447 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 KCNH2Q12809 1159 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 TNIP1Q15025 636 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 KIAA0753Q2KHM9 967 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 PPP4R3AQ6IN85 833 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 MIER3Q7Z3K6 550 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 SRGAP1Q7Z6B7 1085 aa10.24□□□□□ -0.77
PRDM9-201ENST00000296682 ADAT2Q7Z6V5 191 aaKnown RBP10.24□□□□□ -0.77
PRDM9-201ENST00000296682 ZNF713Q8N859 430 aaPredicted RBP10.24□□□□□ -0.77
PRDM9-201ENST00000296682 NFIBO00712 420 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 PEX10O60683 326 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 TRIM49P0CI25 452 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 TRIM49CP0CI26 452 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 HARSP12081 509 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 HMGB2P26583 209 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 POLD1P28340 1107 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 FKBP1AP62942 108 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 SLC9C1Q4G0N8 1177 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 DNAJC21Q5F1R6 531 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 CCDC70Q6NSX1 233 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 RTKN2Q8IZC4 609 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 PIM2Q9P1W9 311 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 HYOU1Q9Y4L1 999 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 BRCA1P38398 1863 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 PPP1R12BO60237 982 aaPredicted RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 FOSP01100 380 aaPredicted RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 USP11P51784 963 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 TAF3Q5VWG9 929 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 WDR59Q6PJI9 974 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 IFT81Q8WYA0 676 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 IDI2Q9BXS1 227 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 GLT8D2Q9H1C3 349 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 HAUS4Q9H6D7 363 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 MAGEF1Q9HAY2 307 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 ZNRF3Q9ULT6 936 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 MRPL11Q9Y3B7 192 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 PCDHA13Q9Y5I0 950 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 TMEM110-MUSTN1A8MSY1 372 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 WNT10BO00744 389 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 BACH1O14867 736 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 EDIL3O43854 480 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 NPM3O75607 178 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 EHHADHQ08426 723 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 MTMR2Q13614 643 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 R3HDM1Q15032 1099 aaKnown RBP10.23□□□□□ -0.77
PRDM9-201ENST00000296682 CENPPQ6IPU0 288 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 SCFD1Q8WVM8 642 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 MTMR8Q96EF0 704 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 TAOK3Q9H2K8 898 aa10.23□□□□□ -0.77
PRDM9-201ENST00000296682 IPO5O00410 1097 aaKnown RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 SLC26A4O43511 780 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ERLIN1O75477 346 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 EPB41P11171 864 aaKnown RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 COG2Q14746 738 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 DALRD3Q5D0E6 543 aaKnown RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 TEX2Q8IWB9 1127 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 FAM151AQ8WW52 585 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 HERVK_113P62684 666 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ALS2CR12Q96Q35 445 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 MMS19Q96T76 1030 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 WDR11Q9BZH6 1224 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ZNF446Q9NWS9 450 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 CHORDC1Q9UHD1 332 aaPredicted RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 DDX41Q9UJV9 622 aaKnown RBP10.22□□□□□ -0.77
PRDM9-201ENST00000296682 USP20Q9Y2K6 914 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ZHX2Q9Y6X8 837 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ENTPD3O75355 529 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 GFPT2O94808 682 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ASNSP08243 561 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 ASIC2Q16515 512 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 EXOC3L4Q17RC7 722 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 MIIPQ5JXC2 388 aa10.22□□□□□ -0.77
PRDM9-201ENST00000296682 FAM102BQ5T8I3 360 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms