RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 CEP72Q9P209 647 aa16.31■□□□□ 0.2
TTC9C-201ENST00000294161 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
TTC9C-201ENST00000294161 TRAF3IP3Q9Y228 551 aa16.31■□□□□ 0.2
TTC9C-201ENST00000294161 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 PDXKO00764 312 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 CLCN6P51797 869 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 KNOP1Q1ED39 458 aaKnown RBP16.3■□□□□ 0.2
TTC9C-201ENST00000294161 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
TTC9C-201ENST00000294161 STXBP4Q6ZWJ1 553 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 MCF2L2Q86YR7 1114 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 TRIM59Q8IWR1 403 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
TTC9C-201ENST00000294161 POLR2AP24928 1970 aaKnown RBP16.3■□□□□ 0.2
TTC9C-201ENST00000294161 NPHP3-ACAD11A0A0J9YXS1 232 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 ANO9A1A5B4 782 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 GAS7O60861 476 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 EPHX2P34913 555 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 CKAP4Q07065 602 aaKnown RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 BRD3Q15059 726 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 ANGEL2Q5VTE6 544 aaKnown RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 PRAMEF18Q5VWM3 479 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 RRAGAQ7L523 313 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 FRMD5Q7Z6J6 570 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 GLIS3Q8NEA6 775 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 NEK9Q8TD19 979 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 LPAR1Q92633 364 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 UIMC1Q96RL1 719 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 METTL14Q9HCE5 456 aaKnown RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 KCND2Q9NZV8 630 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 A0A0U1RQJ8 604 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 SSU72P8A0A1W2PR75 194 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 MEIS1O00470 390 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 AKR1B10O60218 316 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 LCA5LO95447 670 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 BMT2Q1RMZ1 405 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 KIAA1755Q5JYT7 1200 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 EPM2AIP1Q7L775 607 aaPredicted RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 ATRIPQ8WXE1 791 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 SECISBP2LQ93073 1101 aaKnown RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 NACC1Q96RE7 527 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
TTC9C-201ENST00000294161 GGA3Q9NZ52 723 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 SEL1LQ9UBV2 794 aa16.29■□□□□ 0.2
TTC9C-201ENST00000294161 WDR46O15213 610 aaKnown RBP16.28■□□□□ 0.2
TTC9C-201ENST00000294161 PSMD10O75832 226 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 SFR1Q86XK3 245 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 TEKT3Q9BXF9 490 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 IFIH1Q9BYX4 1025 aaKnown RBP16.28■□□□□ 0.2
TTC9C-201ENST00000294161 BHMT2Q9H2M3 363 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 ARFGAP3Q9NP61 516 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 OLFML3Q9NRN5 406 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 TYW1Q9NV66 732 aaKnown RBP16.28■□□□□ 0.2
TTC9C-201ENST00000294161 ARMCX3Q9UH62 379 aaPredicted RBP16.28■□□□□ 0.2
TTC9C-201ENST00000294161 SCN4AP35499 1836 aa16.28■□□□□ 0.2
TTC9C-201ENST00000294161 LRRC53A6NM62 1247 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 EIF3DO15371 548 aaKnown RBP eCLIP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 TACC1O75410 805 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 ERLIN1O75477 346 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 FAM13AO94988 1023 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 ICAM1P05362 532 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 NR2F2P24468 414 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 KIF11P52732 1056 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 PSMC6P62333 389 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 CACNB1Q02641 598 aaPredicted RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 EPHA7Q15375 998 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 SFMBT2Q5VUG0 894 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 PAPD7Q5XG87 772 aaKnown RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 IQCEQ6IPM2 695 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 PRPF38AQ8NAV1 312 aaKnown RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 TRIM58Q8NG06 486 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 BAP1Q92560 729 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 RIT2Q99578 217 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 ZNF577Q9BSK1 485 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 GBP3Q9H0R5 595 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 PUF60Q9UHX1 559 aaKnown RBP16.27■□□□□ 0.2
TTC9C-201ENST00000294161 PCDHA13Q9Y5I0 950 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 SAR1BQ9Y6B6 198 aa16.27■□□□□ 0.2
TTC9C-201ENST00000294161 UBE4BO95155 1302 aa16.27■□□□□ 0.19
TTC9C-201ENST00000294161 CCDC151A5D8V7 595 aa16.26■□□□□ 0.19
TTC9C-201ENST00000294161 BCRP11274 1271 aa16.26■□□□□ 0.19
TTC9C-201ENST00000294161 CYP4A11Q02928 519 aa16.26■□□□□ 0.19
TTC9C-201ENST00000294161 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms