RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 TRIM59Q8IWR1 403 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 TRIM58Q8NG06 486 aa17.41■□□□□ 0.38
NCKIPSD-201ENST00000294129 DDX39AO00148 427 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 HNRNPH3P31942 346 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 CRYGNQ8WXF5 182 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 TMEM39BQ9GZU3 492 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 VPS18Q9P253 973 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 L1RE1Q9UN81 338 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 RABGAP1Q9Y3P9 1069 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 SLC9A1P19634 815 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 POLD1P28340 1107 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 USP14P54578 494 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 CKAP4Q07065 602 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 CEP63Q96MT8 703 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 MRIQ9BWK5 157 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 GLIS2Q9BZE0 524 aaPredicted RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 CEP72Q9P209 647 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 ADAMTS1Q9UHI8 967 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 CCDC66A2RUB6 948 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 ENTPD3O75355 529 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 FOSP01100 380 aaPredicted RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 CASP4P49662 377 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 DLGAP5Q15398 846 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 EZH2Q15910 746 aaKnown RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 HGSNATQ68CP4 663 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 SYT2Q8N9I0 419 aaPredicted RBP17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 MBOAT7Q96N66 472 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 ALS2CR12Q96Q35 445 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 ABCB11O95342 1321 aa17.4■□□□□ 0.38
NCKIPSD-201ENST00000294129 RNASE9P60153 205 aaKnown RBP17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 Q4G0T1 1027 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 WDR18Q9BV38 432 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 ARMCX3Q9UH62 379 aaPredicted RBP17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 SNX12Q9UMY4 172 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 LRRIQ3A6PVS8 624 aaPredicted RBP17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 MAP2K7O14733 419 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 HOXD13P35453 343 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 FAM193AP78312 1265 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 PLS1Q14651 629 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 KNOP1Q1ED39 458 aaKnown RBP17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 CCDC181Q5TID7 509 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 MAEAQ7L5Y9 396 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 IQCDQ96DY2 449 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 DYDC2Q96IM9 177 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 PACSIN1Q9BY11 444 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 VAV3Q9UKW4 847 aa17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 PACSIN2Q9UNF0 486 aaPredicted RBP17.39■□□□□ 0.37
NCKIPSD-201ENST00000294129 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 SLC7A5Q01650 507 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 EN1Q05925 392 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 KLHL30Q0D2K2 578 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 ZC2HC1CQ53FD0 456 aaPredicted RBP17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 OGFOD1Q8N543 542 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 HNRNPLLQ8WVV9 542 aaKnown RBP17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 C10orf71Q711Q0 1435 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 FTCDO95954 541 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 NMT1P30419 496 aaKnown RBP17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 ZNF662Q6ZS27 426 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 MYCT1Q8N699 235 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 MS4A14Q96JA4 679 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 FAM20AQ96MK3 541 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 SPAG5Q96R06 1193 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 GBP3Q9H0R5 595 aa17.38■□□□□ 0.37
NCKIPSD-201ENST00000294129 ANO9A1A5B4 782 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 AKAP3O75969 853 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 GNA14O95837 355 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 FKBP1AP62942 108 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 MOXD1Q6UVY6 613 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 HDAC7Q8WUI4 952 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 OSBPL9Q96SU4 736 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 ZNF70Q9UC06 446 aaPredicted RBP17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 PITPNM2Q9BZ72 1349 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 A0A087X0T9 212 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 FAM13AO94988 1023 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 FAM228BP0C875 321 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 MYBL2P10244 700 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 GPS2Q13227 327 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 UBXN6Q9BZV1 441 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 SERPING1P05155 500 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 XRCC5P13010 732 aaKnown RBP17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 ASIC2Q16515 512 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 GJB7Q6PEY0 223 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 CREG2Q8IUH2 290 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 NOX5Q96PH1 765 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
NCKIPSD-201ENST00000294129 GCOM1H8Y6P7 765 aaPredicted RBP17.36■□□□□ 0.37
NCKIPSD-201ENST00000294129 TBX3O15119 743 aa17.36■□□□□ 0.37
NCKIPSD-201ENST00000294129 GAS7O60861 476 aa17.36■□□□□ 0.37
NCKIPSD-201ENST00000294129 EIF3JO75822 258 aaKnown RBP17.36■□□□□ 0.37
NCKIPSD-201ENST00000294129 NR3C1P04150 777 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms