RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 PPP1R13LQ8WUF5 828 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 RIT2Q99578 217 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 NT5C3AQ9H0P0 336 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 PASKQ96RG2 1323 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 KDM3AQ9Y4C1 1321 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 KRT18P05783 430 aaKnown RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 PAK1Q13153 545 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 TRIM50Q86XT4 487 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 SYT2Q8N9I0 419 aaPredicted RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 ENOX1Q8TC92 643 aaKnown RBP13.04□□□□□ -0.32
SSRP1-201ENST00000278412 ZBTB10Q96DT7 871 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 PCDHA2Q9Y5H9 948 aa13.04□□□□□ -0.32
SSRP1-201ENST00000278412 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 MYBP10242 640 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 UBA1P22314 1058 aaKnown RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 ADORA2AP29274 412 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 KCNB1Q14721 858 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 EPHA7Q15375 998 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 HERC4Q5GLZ8 1057 aaPredicted RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 MAP3K20Q9NYL2 800 aaKnown RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 ABT1Q9ULW3 272 aaKnown RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 ZSWIM8A7E2V4 1837 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 SPATA31C2B4DYI2 1134 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 CAVIN2O95810 425 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 SERPINC1P01008 464 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 HOXD13P35453 343 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 FKBP1BP68106 108 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 IRX5P78411 483 aaPredicted RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 KCTD2Q14681 263 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 STXBP2Q15833 593 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 ZC2HC1CQ53FD0 456 aaPredicted RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 NLRX1Q86UT6 975 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 GABBR1Q9UBS5 961 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 LRRC37A2A6NM11 1700 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 FAM155AB1AL88 458 aaPredicted RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 BACH1O14867 736 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
SSRP1-201ENST00000278412 CAP1Q01518 475 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 DAW1Q8N136 415 aa13.03□□□□□ -0.32
SSRP1-201ENST00000278412 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.03□□□□□ -0.322e-8■□□□□ 9.9
SSRP1-201ENST00000278412 EYA4O95677 639 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 EDNRBP24530 442 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 ACTR2P61160 394 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 SPATA1Q5VX52 437 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 SARM1Q6SZW1 724 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 ANO5Q75V66 913 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 NIPA1Q7RTP0 329 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 JPH1Q9HDC5 661 aaPredicted RBP13.02□□□□□ -0.33
SSRP1-201ENST00000278412 TAB2Q9NYJ8 693 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 PFASO15067 1338 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 PLXNB2O15031 1838 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 USO1O60763 962 aaKnown RBP13.02□□□□□ -0.33
SSRP1-201ENST00000278412 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
SSRP1-201ENST00000278412 ATP4AP20648 1035 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.33
SSRP1-201ENST00000278412 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.33
SSRP1-201ENST00000278412 CTGFP29279 349 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 AMPD3Q01432 767 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 RGMBQ6NW40 437 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 ANKRD23Q86SG2 305 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 SCFD1Q8WVM8 642 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 GPRASP2Q96D09 838 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.33
SSRP1-201ENST00000278412 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 FBXO40Q9UH90 709 aa13.02□□□□□ -0.33
SSRP1-201ENST00000278412 SMTNL1A8MU46 457 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 TISP43B9A030 160 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 EIF3JO75822 258 aaKnown RBP13.01□□□□□ -0.33
SSRP1-201ENST00000278412 ZBTB48P10074 688 aaPredicted RBP13.01□□□□□ -0.33
SSRP1-201ENST00000278412 UBASH3AP57075 661 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 HSDL1Q3SXM5 330 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 PRAMEF19Q5SWL8 479 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 CDKAL1Q5VV42 579 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
SSRP1-201ENST00000278412 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
SSRP1-201ENST00000278412 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 VPS16Q9H269 839 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 MAGEF1Q9HAY2 307 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 TUFT1Q9NNX1 390 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 USP20Q9Y2K6 914 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 MYH11P35749 1972 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 YWHABP31946 246 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms