RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 NT5C2P49902 561 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 ICA1Q05084 483 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 PTGDRQ13258 359 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 PLCB4Q15147 1175 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 ZYXQ15942 572 aaKnown RBP11.4□□□□□ -0.58
UPF3B-201ENST00000276201 USP17L2Q6R6M4 530 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 CREG2Q8IUH2 290 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 FAM114A1Q8IWE2 563 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 ESR2Q92731 530 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 PARK7Q99497 189 aaKnown RBP11.4□□□□□ -0.58
UPF3B-201ENST00000276201 UBAC1Q9BSL1 405 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 CUEDC2Q9H467 287 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 TMOD4Q9NZQ9 345 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 PJA2O43164 708 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 CCT5P48643 541 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 EARS2Q5JPH6 523 aaKnown RBP11.4□□□□□ -0.58
UPF3B-201ENST00000276201 C3orf20Q8ND61 904 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 SECISBP2LQ93073 1101 aaKnown RBP11.4□□□□□ -0.58
UPF3B-201ENST00000276201 C12orf42Q96LP6 360 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 INCENPQ9NQS7 918 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 EXOC1Q9NV70 894 aa11.4□□□□□ -0.58
UPF3B-201ENST00000276201 ABCB11O95342 1321 aa11.4□□□□□ -0.59
UPF3B-201ENST00000276201 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 TACC1O75410 805 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CASP1P29466 404 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 FNTAP49354 379 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CAP1Q01518 475 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 KIF5AQ12840 1032 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 DRP2Q13474 957 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 TTI2Q6NXR4 508 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 C17orf99Q6UX52 265 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 MICALCLQ6ZW33 695 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 C4orf32Q8N8J7 132 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 EIF1ADQ8N9N8 165 aaKnown RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CAGE1Q8TC20 777 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 ZNF287Q9HBT7 754 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 MAGEC2Q9UBF1 373 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CPA4Q9UI42 421 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 MYH10P35580 1976 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 IGKV6D-41A0A0C4DH26 115 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 ENC1O14682 589 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 PSMA7O14818 248 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 SP3Q02447 781 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 MAPK8IP2Q13387 824 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 ZNF444Q8N0Y2 327 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 GIMAP8Q8ND71 665 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 KAT2BQ92831 832 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 EDEM3Q9BZQ6 932 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CCSER1Q9C0I3 900 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 ASCC2Q9H1I8 757 aaPredicted RBP11.39□□□□□ -0.59
UPF3B-201ENST00000276201 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 SH3GLB2Q9NR46 395 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 VPS54Q9P1Q0 977 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 HYOU1Q9Y4L1 999 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 TNKSO95271 1327 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
UPF3B-201ENST00000276201 PLIN4Q96Q06 1357 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 BICDL2A1A5D9 508 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 KLRC4O43908 158 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 EEF2P13639 858 aaKnown RBP11.38□□□□□ -0.59
UPF3B-201ENST00000276201 IDEP14735 1019 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 VCAM1P19320 739 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 GNGT1P63211 74 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
UPF3B-201ENST00000276201 ZNF174Q15697 407 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 FAM47AQ5JRC9 791 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 FOXR2Q6PJQ5 311 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 CATIPQ7Z7H3 387 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 CD99L2Q8TCZ2 262 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 DRC1Q96MC2 740 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 LACRTQ9GZZ8 138 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 SH2D4AQ9H788 454 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 RCCD1A6NED2 376 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 ORC4O43929 436 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 HSF2BPO75031 334 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 BCRP11274 1271 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 IL17AQ16552 155 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
UPF3B-201ENST00000276201 CTU1Q7Z7A3 348 aaKnown RBP11.38□□□□□ -0.59
UPF3B-201ENST00000276201 SPATA4Q8NEY3 305 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 RIN2Q8WYP3 895 aaPredicted RBP11.38□□□□□ -0.59
UPF3B-201ENST00000276201 ZSCAN10Q96SZ4 725 aaPredicted RBP11.38□□□□□ -0.59
UPF3B-201ENST00000276201 BLZF1Q9H2G9 400 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 KBTBD4Q9NVX7 518 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 STIM2Q9P246 746 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
UPF3B-201ENST00000276201 ZSWIM8A7E2V4 1837 aa11.37□□□□□ -0.59
UPF3B-201ENST00000276201 LAD1O00515 517 aa11.37□□□□□ -0.59
UPF3B-201ENST00000276201 WNT7AO00755 349 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms