RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 NOL9Q5SY16 702 aaKnown RBP13.14□□□□□ -0.31
CDKL3-201ENST00000265334 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 NELFCDQ8IXH7 590 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 PRPF38AQ8NAV1 312 aaKnown RBP13.14□□□□□ -0.31
CDKL3-201ENST00000265334 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
CDKL3-201ENST00000265334 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 NAPGQ99747 312 aaPredicted RBP13.14□□□□□ -0.31
CDKL3-201ENST00000265334 BHMT2Q9H2M3 363 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 ZNF446Q9NWS9 450 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 PHIPQ8WWQ0 1821 aa13.14□□□□□ -0.31
CDKL3-201ENST00000265334 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
CDKL3-201ENST00000265334 ZNF263O14978 683 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 PTPRAP18433 802 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 LRCH2Q5VUJ6 765 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 PRAMEF18Q5VWM3 479 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 PURBQ96QR8 312 aaKnown RBP13.13□□□□□ -0.31
CDKL3-201ENST00000265334 RUSC1Q9BVN2 902 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 MMRN2Q9H8L6 949 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 PICK1Q9NRD5 415 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 FAM207AQ9NSI2 230 aaPredicted RBP13.13□□□□□ -0.31
CDKL3-201ENST00000265334 ARHGAP20Q9P2F6 1191 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 TRIM10Q9UDY6 481 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 RABGAP1Q9Y3P9 1069 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 RCCD1A6NED2 376 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 PDXKO00764 312 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 NOL4O94818 638 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 BACE1P56817 501 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 KNOP1Q1ED39 458 aaKnown RBP13.13□□□□□ -0.31
CDKL3-201ENST00000265334 CCDC40Q4G0X9 1142 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
CDKL3-201ENST00000265334 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 RABGGTAQ92696 567 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
CDKL3-201ENST00000265334 C12orf42Q96LP6 360 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 LACRTQ9GZZ8 138 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 OLFML3Q9NRN5 406 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 OGFRQ9NZT2 677 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 FAM184BQ9ULE4 1060 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 MYH11P35749 1972 aa13.13□□□□□ -0.31
CDKL3-201ENST00000265334 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 ARP10275 920 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 VCAM1P19320 739 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CLCN6P51797 869 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 SPP2Q13103 211 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 ADAM9Q13443 819 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 MTMR2Q13614 643 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 PDXDC1Q6P996 788 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 SLC30A10Q6XR72 485 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CCDC155Q8N6L0 562 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 ARID3AQ99856 593 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 WDR11Q9BZH6 1224 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 GUCA1BQ9UMX6 200 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 UTRNP46939 3433 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CETN3O15182 167 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 PLEKP08567 350 aaPredicted RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 FDX1P10109 184 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 BCRP11274 1271 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 GAP43P17677 238 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 UBXN2AP68543 259 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 SETQ01105 290 aaPredicted RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 CEP112Q8N8E3 955 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 NEK11Q8NG66 645 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 SYN2Q92777 582 aaPredicted RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
CDKL3-201ENST00000265334 MXRA8Q9BRK3 442 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 MYH10P35580 1976 aa13.12□□□□□ -0.31
CDKL3-201ENST00000265334 PAPPA2Q9BXP8 1791 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 KRT86O43790 486 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 GAS7O60861 476 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 MYBP10242 640 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
CDKL3-201ENST00000265334 ERCC3P19447 782 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 VAV2P52735 878 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 EPHA7Q15375 998 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 WHAMMP3Q1A5X7 153 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 ILDR2Q71H61 639 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 FRMD5Q7Z6J6 570 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 GOLGA1Q92805 767 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 JAKMIP2Q96AA8 810 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 CCDC42Q96M95 316 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms