RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 KDM3AQ9Y4C1 1321 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 A0A0G2JND7 137 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 EXOC1LA0A1B0GW35 172 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 PSMC4P43686 418 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 TOB1P50616 345 aaPredicted RBP16.31■□□□□ 0.2
CASC3-201ENST00000264645 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 GRK7Q8WTQ7 553 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 EHMT1Q9H9B1 1298 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 PDE2AO00408 941 aaPredicted RBP16.31■□□□□ 0.2
CASC3-201ENST00000264645 GYG2O15488 501 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 PPFIA2O75334 1257 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
CASC3-201ENST00000264645 DCTN4Q9UJW0 460 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 DBR1Q9UK59 544 aaKnown RBP16.31■□□□□ 0.2
CASC3-201ENST00000264645 RASA4BC9J798 803 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 RASA4O43374 803 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 KAZNQ674X7 775 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 TPH2Q8IWU9 490 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 EYA3Q99504 573 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
CASC3-201ENST00000264645 SLITRK6Q9H5Y7 841 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 YEATS2Q9ULM3 1422 aa16.31■□□□□ 0.2
CASC3-201ENST00000264645 UNC13DQ70J99 1090 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 SPDYE1Q8NFV5 336 aaPredicted RBP16.3■□□□□ 0.2
CASC3-201ENST00000264645 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
CASC3-201ENST00000264645 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 NMT2O60551 498 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 FAM153BP0C7A2 387 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 HSPA6P17066 643 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 CTCFP49711 727 aaPredicted RBP16.3■□□□□ 0.2
CASC3-201ENST00000264645 FAM153CQ494X1 144 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 TMEM154Q6P9G4 183 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 RFX8Q6ZV50 586 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 DNAJC7Q99615 494 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 DLGAP2Q9P1A6 1054 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 FAM153AQ9UHL3 310 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 NOL3O60936 208 aaKnown RBP16.3■□□□□ 0.2
CASC3-201ENST00000264645 ATP6V0A4Q9HBG4 840 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 ARL2BPQ9Y2Y0 163 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 PODXLO00592 558 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 DCTN3O75935 186 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 RFC1P35251 1148 aaPredicted RBP16.3■□□□□ 0.2
CASC3-201ENST00000264645 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 KCNB1Q14721 858 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 PRR16Q569H4 304 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 TMEM139Q8IV31 216 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 CEP120Q8N960 986 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 AENQ8WTP8 325 aaKnown RBP16.3■□□□□ 0.2
CASC3-201ENST00000264645 ACSBG1Q96GR2 724 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 IMPG2Q9BZV3 1241 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 TRIM9Q9C026 710 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
CASC3-201ENST00000264645 ARHGEF35A5YM69 484 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 POTEMA6NI47 508 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 RABL6Q3YEC7 729 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 PREPLQ4J6C6 727 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 AGBL2Q5U5Z8 902 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 DTX3LQ8TDB6 740 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.29■□□□□ 0.2
CASC3-201ENST00000264645 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 CUL3Q13618 768 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 TTMPQ5BVD1 217 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 DCUN1D2Q6PH85 259 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 DPH6Q7L8W6 267 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 ELOA2Q8IYF1 753 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 TRPC6Q9Y210 931 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 PDS5AQ29RF7 1337 aaKnown RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 NPHP4O75161 1426 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 CASQ2O14958 399 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 RNASELQ05823 741 aaKnown RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 SLC18A3Q16572 532 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 ANKRD20A8PQ5CZ79 823 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.29■□□□□ 0.2
CASC3-201ENST00000264645 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
CASC3-201ENST00000264645 MKRN4PQ13434 485 aaPredicted RBP16.28■□□□□ 0.2
CASC3-201ENST00000264645 CCDC89Q8N998 374 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 HIPK4Q8NE63 616 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 TEKT4Q8WW24 435 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 KAT2BQ92831 832 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 ZNF653Q96CK0 615 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 ATP5HO75947 161 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 ATP6V1G2O95670 118 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 PLCG2P16885 1265 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 MAP7D1Q3KQU3 841 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 FAM186BQ8IYM0 893 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 TMBIM4Q9HC24 238 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 G3BP2Q9UN86 482 aaKnown RBP16.28■□□□□ 0.2
CASC3-201ENST00000264645 XDHP47989 1333 aa16.28■□□□□ 0.2
CASC3-201ENST00000264645 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms