RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 TPM1P09493 284 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 SKILP12757 684 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 PBX1P40424 430 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 QARSP47897 775 aaKnown RBP11.09□□□□□ -0.63
SEC22C-201ENST00000264454 PMS1P54277 932 aaKnown RBP11.09□□□□□ -0.63
SEC22C-201ENST00000264454 HERVK_113P62684 666 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 TRIM14Q14142 442 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 CTTNQ14247 550 aaKnown RBP11.09□□□□□ -0.63
SEC22C-201ENST00000264454 STXBP2Q15833 593 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 ZNF746Q6NUN9 644 aaPredicted RBP11.09□□□□□ -0.63
SEC22C-201ENST00000264454 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 IRF2BP1Q8IU81 584 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 SPATC1LQ9H0A9 340 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 ASCC2Q9H1I8 757 aaPredicted RBP11.09□□□□□ -0.63
SEC22C-201ENST00000264454 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 DBR1Q9UK59 544 aaKnown RBP11.09□□□□□ -0.63
SEC22C-201ENST00000264454 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 ODF2LQ9ULJ1 636 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 PCDHA2Q9Y5H9 948 aa11.09□□□□□ -0.63
SEC22C-201ENST00000264454 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 NFASCO94856 1347 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 A0A1W2PQC6 194 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 WDR64B1ANS9 1081 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 EIF3JO75822 258 aaKnown RBP11.08□□□□□ -0.64
SEC22C-201ENST00000264454 GNA14O95837 355 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 GUCY2CP25092 1073 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 DNM2P50570 870 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 FKBP3Q00688 224 aaKnown RBP11.08□□□□□ -0.64
SEC22C-201ENST00000264454 ITGB3BPQ13352 177 aaPredicted RBP11.08□□□□□ -0.64
SEC22C-201ENST00000264454 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
SEC22C-201ENST00000264454 STXBP4Q6ZWJ1 553 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 C1orf186Q6ZWK4 172 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 C4orf19Q8IY42 314 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 SMAP1Q8IYB5 467 aaPredicted RBP11.08□□□□□ -0.64
SEC22C-201ENST00000264454 IQCDQ96DY2 449 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 CEP63Q96MT8 703 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 REEP2Q9BRK0 252 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 LXNQ9BS40 222 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 SEMA6BQ9H3T3 888 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 OLFML3Q9NRN5 406 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 KCND1Q9NSA2 647 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 BTBD7Q9P203 1132 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 SLC45A1Q9Y2W3 748 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 SAMM50Q9Y512 469 aa11.08□□□□□ -0.64
SEC22C-201ENST00000264454 OTOFQ9HC10 1997 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 LOC102724159A0A0B4J2E5 919 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 ARHGEF35A5YM69 484 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 LGALS16A8MUM7 142 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 CCP110O43303 1012 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 FAM13AO94988 1023 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PRKCSHP14314 528 aaPredicted RBP11.07□□□□□ -0.64
SEC22C-201ENST00000264454 ICAM3P32942 547 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PSMC5P62195 406 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 CCZ1BP86790 482 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 CCZ1P86791 482 aaPredicted RBP11.07□□□□□ -0.64
SEC22C-201ENST00000264454 LRMPQ12912 555 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PWP2Q15269 919 aaKnown RBP11.07□□□□□ -0.64
SEC22C-201ENST00000264454 EDRF1Q3B7T1 1238 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PIGOQ8TEQ8 1089 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 HPS3Q969F9 1004 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 CCDC51Q96ER9 411 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
SEC22C-201ENST00000264454 TUBGCP2Q9BSJ2 902 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 VPS16Q9H269 839 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 MROH8Q9H579 483 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 ANKEF1Q9NU02 776 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PYCARDQ9ULZ3 195 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PCDHA10Q9Y5I2 948 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 COL11A1P12107 1806 aaPredicted RBP11.07□□□□□ -0.64
SEC22C-201ENST00000264454 PTPRFP10586 1907 aa11.07□□□□□ -0.64
SEC22C-201ENST00000264454 NPHP3-ACAD11A0A0J9YXS1 232 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 AKR1B15C9JRZ8 316 aaPredicted RBP11.06□□□□□ -0.64
SEC22C-201ENST00000264454 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 DDX39AO00148 427 aaKnown RBP11.06□□□□□ -0.64
SEC22C-201ENST00000264454 PDXKO00764 312 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
SEC22C-201ENST00000264454 TEX33O43247 280 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 STX10O60499 249 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 OFD1O75665 1012 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 MAPTP10636 758 aaKnown RBP11.06□□□□□ -0.64
SEC22C-201ENST00000264454 CETPP11597 493 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 MTIF2P46199 727 aaKnown RBP11.06□□□□□ -0.64
SEC22C-201ENST00000264454 GTF2A2P52657 109 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 ZNF131P52739 623 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 UBXN1Q04323 297 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 MOGSQ13724 837 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 KNOP1Q1ED39 458 aaKnown RBP11.06□□□□□ -0.64
SEC22C-201ENST00000264454 BMT2Q1RMZ1 405 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 ZCWPW2Q504Y3 356 aa11.06□□□□□ -0.64
SEC22C-201ENST00000264454 GPAT2Q6NUI2 795 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms