RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 MAGEA9P43362 315 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 CORO7P57737 925 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 ZNF543Q08ER8 600 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 PPFIA1Q13136 1202 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 ARSHQ5FYA8 562 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 MAEAQ7L5Y9 396 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 ZNF571Q7Z3V5 609 aaPredicted RBP10.02□□□□□ -0.81
MSH4-201ENST00000263187 SFR1Q86XK3 245 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 IFT20Q8IY31 132 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 TBC1D16Q8TBP0 767 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 TAF4BQ92750 862 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 RGL1Q9NZL6 768 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 CEP72Q9P209 647 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 HDAC9Q9UKV0 1011 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 ATP2C2O75185 946 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 TTLL1O95922 423 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 CYP11B2P19099 503 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 CCDC65Q8IXS2 484 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 CERS5Q8N5B7 392 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 P2RX7Q99572 595 aaKnown RBP10.02□□□□□ -0.81
MSH4-201ENST00000263187 CELF4Q9BZC1 486 aaKnown RBP10.02□□□□□ -0.81
MSH4-201ENST00000263187 TSPYL1Q9H0U9 437 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 DPH5Q9H2P9 285 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 SERPINB13Q9UIV8 391 aa10.02□□□□□ -0.81
MSH4-201ENST00000263187 GRIN2DO15399 1336 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 CNTNAP4Q9C0A0 1308 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 SHTN1A0MZ66 631 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 FLT3P36888 993 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 MRPL12P52815 198 aaKnown RBP10.01□□□□□ -0.81
MSH4-201ENST00000263187 QRICH1Q2TAL8 776 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 TMEM119Q4V9L6 283 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 RNF187Q5TA31 235 aaPredicted RBP10.01□□□□□ -0.81
MSH4-201ENST00000263187 ZNF662Q6ZS27 426 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 RIC8AQ9NPQ8 531 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 ROBO3Q96MS0 1386 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 EIF3HO15372 352 aaKnown RBP eCLIP10.01□□□□□ -0.81
MSH4-201ENST00000263187 OPA1O60313 960 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 GFPT2O94808 682 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 RPS6KA1Q15418 735 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 NAB2Q15742 525 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 SLC18A3Q16572 532 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 CATSPER3Q86XQ3 398 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 MSL3Q8N5Y2 521 aaKnown RBP10.01□□□□□ -0.81
MSH4-201ENST00000263187 LRRC4CQ9HCJ2 640 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 AMACRQ9UHK6 382 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 PLAAQ9Y263 795 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 SMIM23A6NLE4 172 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 CETN3O15182 167 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 RPS6KA5O75582 802 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 GCNT3O95395 438 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 SERPINB2P05120 415 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 PDIA5Q14554 519 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 ZCWPW2Q504Y3 356 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 ZC2HC1CQ53FD0 456 aaPredicted RBP10.01□□□□□ -0.81
MSH4-201ENST00000263187 ODF2Q5BJF6 829 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 CHADLQ6NUI6 762 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 TRIM59Q8IWR1 403 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 UHMK1Q8TAS1 419 aaKnown RBP10.01□□□□□ -0.81
MSH4-201ENST00000263187 U2AF1L4Q8WU68 220 aaKnown RBP10.01□□□□□ -0.81
MSH4-201ENST00000263187 REEP2Q9BRK0 252 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 BHMT2Q9H2M3 363 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 PKD2L1Q9P0L9 805 aa10.01□□□□□ -0.81
MSH4-201ENST00000263187 ZBTB5O15062 677 aa10□□□□□ -0.81
MSH4-201ENST00000263187 AKAP3O75969 853 aa10□□□□□ -0.81
MSH4-201ENST00000263187 TMOD1P28289 359 aa10□□□□□ -0.81
MSH4-201ENST00000263187 PPP1R2P41236 205 aa10□□□□□ -0.81
MSH4-201ENST00000263187 ERVK-9P63128 1117 aa10□□□□□ -0.81
MSH4-201ENST00000263187 CTTNQ14247 550 aaKnown RBP10□□□□□ -0.81
MSH4-201ENST00000263187 ASPRV1Q53RT3 343 aa10□□□□□ -0.81
MSH4-201ENST00000263187 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
MSH4-201ENST00000263187 UBLCP1Q8WVY7 318 aaPredicted RBP10□□□□□ -0.81
MSH4-201ENST00000263187 KAT2BQ92831 832 aa10□□□□□ -0.81
MSH4-201ENST00000263187 SH2D3AQ9BRG2 576 aa10□□□□□ -0.81
MSH4-201ENST00000263187 NEUROG2Q9H2A3 272 aa10□□□□□ -0.81
MSH4-201ENST00000263187 DBNDD1Q9H9R9 158 aa10□□□□□ -0.81
MSH4-201ENST00000263187 ARMCX3Q9UH62 379 aaPredicted RBP10□□□□□ -0.81
MSH4-201ENST00000263187 GOLGA8KD6RF30 607 aa10□□□□□ -0.81
MSH4-201ENST00000263187 LCA5LO95447 670 aa10□□□□□ -0.81
MSH4-201ENST00000263187 PLCG2P16885 1265 aa10□□□□□ -0.81
MSH4-201ENST00000263187 SHMT1P34896 483 aa10□□□□□ -0.81
MSH4-201ENST00000263187 COG2Q14746 738 aa10□□□□□ -0.81
MSH4-201ENST00000263187 ALKBH5Q6P6C2 394 aaKnown RBP10□□□□□ -0.81
MSH4-201ENST00000263187 EMBQ6PCB8 327 aa10□□□□□ -0.81
MSH4-201ENST00000263187 ELMO3Q96BJ8 720 aa10□□□□□ -0.81
MSH4-201ENST00000263187 ANO3Q9BYT9 981 aa10□□□□□ -0.81
MSH4-201ENST00000263187 OSGEPQ9NPF4 335 aa10□□□□□ -0.81
MSH4-201ENST00000263187 DLEC1Q9Y238 1755 aa10□□□□□ -0.81
MSH4-201ENST00000263187 EEF2P13639 858 aaKnown RBP9.99□□□□□ -0.81
MSH4-201ENST00000263187 UCHL3P15374 230 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
MSH4-201ENST00000263187 EXOC3L4Q17RC7 722 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 MEI1Q5TIA1 1274 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 DAAM2Q86T65 1068 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 TADA2BQ86TJ2 420 aa9.99□□□□□ -0.81
MSH4-201ENST00000263187 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms