RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MAFBQ9Y5Q3 323 aaPredicted RBP18.69■□□□□ 0.58
CHCHD3-201ENST00000262570 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 BACH1O14867 736 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 COL6A1P12109 1028 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 GRIN1Q05586 938 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 KCNG4Q8TDN1 519 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 DIS3LQ8TF46 1054 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 GLG1Q92896 1179 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 GLT1D1Q96MS3 346 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 HSD17B14Q9BPX1 270 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 SCAND2PQ9GZW5 306 aaPredicted RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 ZNF302Q9NR11 478 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 GABBR1Q9UBS5 961 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 HAS3O00219 553 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 P4HBP07237 508 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 FAM160B1Q5W0V3 765 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 UBE2Q1Q7Z7E8 422 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 KRI1Q8N9T8 703 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 TNPO1Q92973 898 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 PAWRQ96IZ0 340 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 EIF2AK1Q9BQI3 630 aaKnown RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 KATNAL1Q9BW62 490 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 ERAP1Q9NZ08 941 aa18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 ZNF215Q9UL58 517 aaPredicted RBP18.68■□□□□ 0.58
CHCHD3-201ENST00000262570 IGSF9BQ9UPX0 1349 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 SLITRK3O94933 977 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 LONP1P36776 959 aaKnown RBP18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 SLC26A2P50443 739 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 SOX10P56693 466 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 PDXDC2PQ6P474 469 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 AK8Q96MA6 479 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 SENP6Q9GZR1 1112 aaPredicted RBP18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 STARD7Q9NQZ5 370 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 RGL1Q9NZL6 768 aa18.67■□□□□ 0.58
CHCHD3-201ENST00000262570 PP2D1A8MPX8 630 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 ZNF862O60290 1169 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 ATP4AP20648 1035 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 CDC25AP30304 524 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 QARSP47897 775 aaKnown RBP18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 PSEN2P49810 448 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 PSMC5P62195 406 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 MFSD10Q14728 455 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 UGCGQ16739 394 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 KIAA0753Q2KHM9 967 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 NECAB2Q7Z6G3 386 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 BANK1Q8NDB2 785 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 ERMNQ8TAM6 284 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 NEK9Q8TD19 979 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 ATP6V0A1Q93050 837 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 DYDC2Q96IM9 177 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 SPATA32Q96LK8 384 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 CLIC6Q96NY7 704 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 CSRNP2Q9H175 543 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 RNPEPQ9H4A4 650 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 STK24Q9Y6E0 443 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 GRIN2DO15399 1336 aa18.66■□□□□ 0.58
CHCHD3-201ENST00000262570 SPATA31C1P0DKV0 1188 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 RPA1P27694 616 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 PSMC6P62333 389 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 CYP4A11Q02928 519 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 AXDND1Q5T1B0 1012 aaPredicted RBP18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 HAUS3Q68CZ6 603 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 CATSPER3Q86XQ3 398 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 VTI1AQ96AJ9 217 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 LXNQ9BS40 222 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 POLR3CQ9BUI4 534 aaPredicted RBP18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 C11orf49Q9H6J7 331 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 WRAP73Q9P2S5 460 aaPredicted RBP18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 PCDHA7Q9UN72 937 aa18.65■□□□□ 0.58
CHCHD3-201ENST00000262570 MED24O75448 989 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 MARK3P27448 753 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 ME1P48163 572 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 ITGA7Q13683 1181 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 CTTNQ14247 550 aaKnown RBP18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 PLCB4Q15147 1175 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 NBPF20Q3BBV1 942 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 KRT79Q5XKE5 535 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 SLC43A3Q8NBI5 491 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 ZSWIM4Q9H7M6 989 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 GDPD2Q9HCC8 539 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 TUFT1Q9NNX1 390 aa18.64■□□□□ 0.58
CHCHD3-201ENST00000262570 SCN10AQ9Y5Y9 1956 aa18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 A0A0U1RQG5 324 aaPredicted RBP18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 DKC1O60832 514 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 CUTAO60888 179 aa18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 SPECC1Q5M775 1068 aa18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 TPH2Q8IWU9 490 aa18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 C4orf19Q8IY42 314 aa18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 ZNF579Q8NAF0 562 aaKnown RBP18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.57
CHCHD3-201ENST00000262570 POTEB3A0JP26 581 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 STBD1O95210 358 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 LYPLA2O95372 231 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 MUTP22033 750 aa18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 CCT6AP40227 531 aaKnown RBP18.63■□□□□ 0.57
CHCHD3-201ENST00000262570 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms