RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 NFS1Q9Y697 457 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 COL22A1Q8NFW1 1626 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-201ENST00000261366 PALM3A6NDB9 673 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-201ENST00000261366 SCTRP47872 440 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 DCAF17Q5H9S7 520 aaPredicted RBP17.4■□□□□ 0.38
LMNB1-201ENST00000261366 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 LRRC45Q96CN5 670 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 CEP83Q9Y592 693 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 SRCAPQ6ZRS2 3230 aa17.4■□□□□ 0.38
LMNB1-201ENST00000261366 TOM1O60784 492 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 PEX26Q7Z412 305 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
LMNB1-201ENST00000261366 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
LMNB1-201ENST00000261366 PVALEFA0A1B0GWK0 134 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 RBAK-RBAKDNI3L0D1 243 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 PPP1R7Q15435 360 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 SPTY2D1Q68D10 685 aaPredicted RBP17.39■□□□□ 0.37
LMNB1-201ENST00000261366 GJB7Q6PEY0 223 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 DAAM2Q86T65 1068 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 BANK1Q8NDB2 785 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 HVCN1Q96D96 273 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 NR2E1Q9Y466 385 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 LRP5O75197 1615 aa17.39■□□□□ 0.37
LMNB1-201ENST00000261366 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 HGSO14964 777 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 CTNND1O60716 968 aaKnown RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 ADAM9Q13443 819 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 BYSLQ13895 437 aaKnown RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 GKAP1Q5VSY0 366 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 GALNT17Q6IS24 598 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 HIBCHQ6NVY1 386 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 CCDC113Q9H0I3 377 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 BSDC1Q9NW68 430 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 MCM8Q9UJA3 840 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 ZNF652Q9Y2D9 606 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 PGRMC1O00264 195 aaKnown RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 KCNH2Q12809 1159 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 PREPLQ4J6C6 727 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 RUFY4Q6ZNE9 571 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 PNMA8AQ86V59 439 aaPredicted RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 TEX2Q8IWB9 1127 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 TCP11Q8WWU5 503 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 RAD21O60216 631 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 IFNAR2P48551 515 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 SBK1Q52WX2 424 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 ALKBH5Q6P6C2 394 aaKnown RBP17.38■□□□□ 0.37
LMNB1-201ENST00000261366 FBXO33Q7Z6M2 555 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 GPCPD1Q9NPB8 672 aa17.38■□□□□ 0.37
LMNB1-201ENST00000261366 CASZ1Q86V15 1759 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 CAND2O75155 1236 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 SHBGP04278 402 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
LMNB1-201ENST00000261366 FAM133BQ5BKY9 247 aaKnown RBP17.37■□□□□ 0.37
LMNB1-201ENST00000261366 MSL1Q68DK7 614 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
LMNB1-201ENST00000261366 EYA3Q99504 573 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 STK17AQ9UEE5 414 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 KIAA1024Q9UPX6 916 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 SKAP2O75563 359 aaPredicted RBP17.37■□□□□ 0.37
LMNB1-201ENST00000261366 CLTAP09496 248 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 RASA1P20936 1047 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 ABCB4P21439 1286 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 SLCO1A2P46721 670 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 USP11P51784 963 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 SGSM3Q96HU1 749 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 PAGR1Q9BTK6 254 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 VEZTQ9HBM0 779 aa17.37■□□□□ 0.37
LMNB1-201ENST00000261366 MYH14Q7Z406 1995 aaKnown RBP17.36■□□□□ 0.37
LMNB1-201ENST00000261366 PHLPP1O60346 1717 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 PSEN1P49768 467 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 ZNF211Q13398 564 aaPredicted RBP17.36■□□□□ 0.37
LMNB1-201ENST00000261366 CUL1Q13616 776 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 NBPF9Q3BBW0 867 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
LMNB1-201ENST00000261366 SCFD2Q8WU76 684 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 MTMR9Q96QG7 549 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 RIC8AQ9NPQ8 531 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 DONSONQ9NYP3 566 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 TMEM59LQ9UK28 342 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 FGGP02679 453 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 CLNS1AP54105 237 aaKnown RBP17.36■□□□□ 0.37
LMNB1-201ENST00000261366 ACCSLQ4AC99 568 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 TMC3Q7Z5M5 1100 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 U2AF1L4Q8WU68 220 aaKnown RBP17.36■□□□□ 0.37
LMNB1-201ENST00000261366 DNAJC19Q96DA6 116 aa17.36■□□□□ 0.37
LMNB1-201ENST00000261366 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 POTEB3A0JP26 581 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 POTECB2RU33 542 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 MYBP10242 640 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 NR2F2P24468 414 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 PDE6BP35913 854 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 NAA25Q14CX7 972 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 UBAP2Q5T6F2 1119 aaKnown RBP17.35■□□□□ 0.37
LMNB1-201ENST00000261366 POTEBQ6S5H4 581 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 GLG1Q92896 1179 aa17.35■□□□□ 0.37
LMNB1-201ENST00000261366 CEP95Q96GE4 821 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms