RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 CCDC94Q9BW85 323 aaPredicted RBP18.56■□□□□ 0.56
ACTN4-201ENST00000252699 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 LGALS16A8MUM7 142 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 PROCA1Q8NCQ7 364 aaPredicted RBP18.56■□□□□ 0.56
ACTN4-201ENST00000252699 MAIP1Q8WWC4 291 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 ANKRD36BP1Q96IX9 119 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 GABBR1Q9UBS5 961 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 UBE2Q2LH0YL09 131 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 MFAP3LO75121 409 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 GAS8O95995 478 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 SMARCA1P28370 1054 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 CALCOCO1Q9P1Z2 691 aa18.56■□□□□ 0.56
ACTN4-201ENST00000252699 SWSAP1Q6NVH7 229 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 GUF1Q8N442 669 aaKnown RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 SPTLC3Q9NUV7 552 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 FEZ2Q9UHY8 353 aaPredicted RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 NDUFA10O95299 355 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 NR3C1P04150 777 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 RSPH3Q86UC2 560 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 CCDC170Q8IYT3 715 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 GIMAP8Q8ND71 665 aaPredicted RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 FAM76AQ8TAV0 307 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 TEX13BQ9BXU2 312 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 ELP3Q9H9T3 547 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 KCNK9Q9NPC2 374 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 ZNF233A6NK53 670 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 NEDD9Q14511 834 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 RBM46Q8TBY0 533 aaKnown RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 GDAP1L1Q96MZ0 367 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 NHEJ1Q9H9Q4 299 aaPredicted RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 ATP6V0A4Q9HBG4 840 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 RGL1Q9NZL6 768 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 TLR3O15455 904 aaKnown RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 MAD2L2Q9UI95 211 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
ACTN4-201ENST00000252699 CDC23Q9UJX2 597 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 FAM169AQ9Y6X4 670 aa18.55■□□□□ 0.56
ACTN4-201ENST00000252699 TRIM9Q9C026 710 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 RPS6KC1Q96S38 1066 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 XPOTO43592 962 aaKnown RBP18.54■□□□□ 0.56
ACTN4-201ENST00000252699 PSMC5P62195 406 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 BAATQ14032 418 aaPredicted RBP18.54■□□□□ 0.56
ACTN4-201ENST00000252699 MESDQ14696 234 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 EPHA7Q15375 998 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 FAM167AQ96KS9 214 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 CEP63Q96MT8 703 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 MSTO1Q9BUK6 570 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 EFCAB8A8MWE9 144 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 C19orf81C9J6K1 198 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 MYO1FO00160 1098 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 ADAT2Q7Z6V5 191 aaKnown RBP18.54■□□□□ 0.56
ACTN4-201ENST00000252699 MED10Q9BTT4 135 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 NSRP1Q9H0G5 558 aaKnown RBP18.54■□□□□ 0.56
ACTN4-201ENST00000252699 NXF1Q9UBU9 619 aaKnown RBP18.54■□□□□ 0.56
ACTN4-201ENST00000252699 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
ACTN4-201ENST00000252699 SLC16A4O15374 487 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 FCER1AP12319 257 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 SEC23AQ15436 765 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 KNOP1Q1ED39 458 aaKnown RBP18.53■□□□□ 0.56
ACTN4-201ENST00000252699 SCYL2Q6P3W7 929 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 INTS8Q75QN2 995 aaKnown RBP18.53■□□□□ 0.56
ACTN4-201ENST00000252699 PSMD1Q99460 953 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 FAM49AQ9H0Q0 323 aaPredicted RBP18.53■□□□□ 0.56
ACTN4-201ENST00000252699 PARP2Q9UGN5 583 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 CCDC63Q8NA47 563 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 NUB1Q9Y5A7 615 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 PLSCR1O15162 318 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 IFNB1P01574 187 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 CEP128Q6ZU80 1094 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 XXYLT1Q8NBI6 393 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 MIS12Q9H081 205 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 TMEM60Q9H2L4 133 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 STAM2O75886 525 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 SERPING1P05155 500 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 FASTKD5Q7L8L6 764 aaKnown RBP18.53■□□□□ 0.56
ACTN4-201ENST00000252699 CCDC117Q8IWD4 279 aaPredicted RBP18.53■□□□□ 0.56
ACTN4-201ENST00000252699 RAB17Q9H0T7 212 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 SEL1LQ9UBV2 794 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 ADAMTS1Q9UHI8 967 aa18.53■□□□□ 0.56
ACTN4-201ENST00000252699 WTIPA6NIX2 430 aaPredicted RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 ARHGEF6Q15052 776 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 HADHQ16836 314 aaKnown RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 FAM81BQ96LP2 452 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 NACA2Q9H009 215 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 RAB20Q9NX57 234 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 ATP2C2O75185 946 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 HPDP32754 393 aaPredicted RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 KIF11P52732 1056 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 KCNB1Q14721 858 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 UAP1Q16222 522 aaPredicted RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 NBPF11Q86T75 865 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 DHX40Q8IX18 779 aaKnown RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 SREK1Q8WXA9 508 aaKnown RBP18.52■□□□□ 0.56
ACTN4-201ENST00000252699 ZNF653Q96CK0 615 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 MTFR1LQ9H019 292 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 PCDHA10Q9Y5I2 948 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 GOLGA6BA6NDN3 693 aa18.52■□□□□ 0.56
ACTN4-201ENST00000252699 THAP12O43422 761 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms