RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TNIP1Q15025 636 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 ZHX3Q9H4I2 956 aa19.9■□□□□ 0.78
PTPN12-201ENST00000248594 USP15Q9Y4E8 981 aaPredicted RBP19.9■□□□□ 0.78
PTPN12-201ENST00000248594 SOS2Q07890 1332 aaPredicted RBP19.9■□□□□ 0.78
PTPN12-201ENST00000248594 BICDL2A1A5D9 508 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 GRID2IPA4D2P6 1211 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 ECHS1P30084 290 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 KLC1Q07866 573 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 RCN2Q14257 317 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 IFIT1BQ5T764 474 aaKnown RBP19.89■□□□□ 0.78
PTPN12-201ENST00000248594 SEPT14Q6ZU15 432 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 ZNF317Q96PQ6 595 aaPredicted RBP19.89■□□□□ 0.78
PTPN12-201ENST00000248594 ZMYND12Q9H0C1 365 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 TBK1Q9UHD2 729 aa19.89■□□□□ 0.78
PTPN12-201ENST00000248594 MAP3K15Q6ZN16 1313 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 PGRMC1O00264 195 aaKnown RBP19.89■□□□□ 0.77
PTPN12-201ENST00000248594 CETN3O15182 167 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 CREB1P16220 341 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 TARSP26639 723 aaKnown RBP19.89■□□□□ 0.77
PTPN12-201ENST00000248594 STRBPQ96SI9 672 aaKnown RBP19.89■□□□□ 0.77
PTPN12-201ENST00000248594 A6NHS1 94 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 BMP15O95972 392 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 RIPK1Q13546 671 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 UBE4AQ14139 1066 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 SLC5A9Q2M3M2 681 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 CATIPQ7Z7H3 387 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 DTX3LQ8TDB6 740 aa19.89■□□□□ 0.77
PTPN12-201ENST00000248594 UBE2OQ9C0C9 1292 aaKnown RBP19.89■□□□□ 0.77
PTPN12-201ENST00000248594 TTC36A6NLP5 189 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 GSTA1P08263 222 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 ETS2P15036 469 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 IFNL2Q8IZJ0 200 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 TTC8Q8TAM2 541 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 CNKSR1Q969H4 720 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 CDK5RAP3Q96JB5 506 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 RAB17Q9H0T7 212 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 SEPT11Q9NVA2 429 aaKnown RBP19.88■□□□□ 0.77
PTPN12-201ENST00000248594 FGGP02679 453 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 IFIT5Q13325 482 aaKnown RBP19.88■□□□□ 0.77
PTPN12-201ENST00000248594 INF2Q27J81 1249 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 TSNAXIP1Q2TAA8 658 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 ZNF662Q6ZS27 426 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 INTS8Q75QN2 995 aaKnown RBP19.88■□□□□ 0.77
PTPN12-201ENST00000248594 ZNF572Q7Z3I7 529 aaPredicted RBP19.88■□□□□ 0.77
PTPN12-201ENST00000248594 NALCNQ8IZF0 1738 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 CCDC194A0A1B0GVG4 234 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 UBTFL6P0CB48 400 aaPredicted RBP19.88■□□□□ 0.77
PTPN12-201ENST00000248594 ZCCHC18P0CG32 403 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 PLCG1P19174 1290 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 FITM2Q8N6M3 262 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 METTL13Q8N6R0 699 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 FAM81AQ8TBF8 368 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 TMX4Q9H1E5 349 aaPredicted RBP19.88■□□□□ 0.77
PTPN12-201ENST00000248594 TMEM60Q9H2L4 133 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 RNF14Q9UBS8 474 aa19.88■□□□□ 0.77
PTPN12-201ENST00000248594 ENTPD5O75356 428 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 ALDH3A1P30838 453 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 PDE6CP51160 858 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 PKN1Q16512 942 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 EAPPQ56P03 285 aaPredicted RBP19.87■□□□□ 0.77
PTPN12-201ENST00000248594 EMC10Q5UCC4 262 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 CCNJLQ8IV13 435 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 NELFCDQ8IXH7 590 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 NACAP1Q9BZK3 213 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 HAO1Q9UJM8 370 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 NR2E1Q9Y466 385 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 H7C1W4 665 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 SNX3O60493 162 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 TPP2P29144 1249 aaPredicted RBP19.87■□□□□ 0.77
PTPN12-201ENST00000248594 SUPT20HQ8NEM7 779 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 ARHGEF2Q92974 986 aaKnown RBP19.87■□□□□ 0.77
PTPN12-201ENST00000248594 RMDN2Q96LZ7 410 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 FAM210AQ96ND0 272 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 GBP5Q96PP8 586 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 PCMTD2Q9NV79 361 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 AFF2P51816 1311 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 STRCP1A6NGW2 1772 aa19.87■□□□□ 0.77
PTPN12-201ENST00000248594 MEI1Q5TIA1 1274 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 PDXDC1Q6P996 788 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 NEK9Q8TD19 979 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 PHF20Q9BVI0 1012 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 TRIM7Q9C029 511 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 WTIPA6NIX2 430 aaPredicted RBP19.86■□□□□ 0.77
PTPN12-201ENST00000248594 TRAF5O00463 557 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 ITIH4Q14624 930 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 SPTY2D1Q68D10 685 aaPredicted RBP19.86■□□□□ 0.77
PTPN12-201ENST00000248594 GALNT15Q8N3T1 639 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 DNAJC9Q8WXX5 260 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 RBM41Q96IZ5 413 aaKnown RBP19.86■□□□□ 0.77
PTPN12-201ENST00000248594 VCXQ9H320 206 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 OCEL1Q9H607 264 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 CNNM2Q9H8M5 875 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 BSDC1Q9NW68 430 aaPredicted RBP19.86■□□□□ 0.77
PTPN12-201ENST00000248594 NPHP3-ACAD11A0A0J9YXS1 232 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 NMT2O60551 498 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 ACSL3O95573 720 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 LONRF1Q17RB8 773 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 NAALADL2Q58DX5 795 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 BICDL1Q6ZP65 573 aa19.86■□□□□ 0.77
PTPN12-201ENST00000248594 LCORLQ8N3X6 602 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms