RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 TRIM59Q8IWR1 403 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 KLHL7Q8IXQ5 586 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 TSEN2Q8NCE0 465 aaKnown RBP10.07□□□□□ -0.8
SYDE2-201ENST00000234668 NOX5Q96PH1 765 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 HDAC9Q9UKV0 1011 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 DNM3Q9UQ16 869 aa10.07□□□□□ -0.8
SYDE2-201ENST00000234668 hCG_1984214I3L0E3 225 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 CETN3O15182 167 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 MSH4O15457 936 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 ECE2O60344 883 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 GLI1P08151 1106 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 FAM153BP0C7A2 387 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 CDK17Q00537 523 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 PSMD2Q13200 908 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 FAM153CQ494X1 144 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 ZNF713Q8N859 430 aaPredicted RBP10.06□□□□□ -0.8
SYDE2-201ENST00000234668 ALS2CR12Q96Q35 445 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 SPAG5Q96R06 1193 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 AMNQ9BXJ7 453 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 TSGA10Q9BZW7 698 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 FAM153AQ9UHL3 310 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 RSPH14Q9UHP6 348 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 ADAMTSL1Q8N6G6 1762 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 OPLAHO14841 1288 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 NPR1P16066 1061 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 CARSP49589 748 aaKnown RBP10.06□□□□□ -0.8
SYDE2-201ENST00000234668 SPIRE1Q08AE8 756 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 HHIPL2Q6UWX4 724 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 LENG9Q96B70 501 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 KRT12Q99456 494 aa10.06□□□□□ -0.8
SYDE2-201ENST00000234668 MAST2Q6P0Q8 1798 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ZC3H4Q9UPT8 1303 aaKnown RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ANO9A1A5B4 782 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ACTN2P35609 894 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 PAFAH1B1P43034 410 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 NT5C2P49902 561 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 GUCY2DQ02846 1103 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 COBLL1Q53SF7 1204 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 HAUS3Q68CZ6 603 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ZNF571Q7Z3V5 609 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 C10orf67Q8IYJ2 551 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ETNPPLQ8TBG4 499 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 CSRNP1Q96S65 589 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 CEP72Q9P209 647 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 NFU1Q9UMS0 254 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 KLRG2A4D1S0 409 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 LRRN2O75325 713 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 APBA3O96018 575 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 SERPING1P05155 500 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ASIC2Q16515 512 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 SYDE2Q5VT97 1194 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 SH2D3CQ8N5H7 860 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 RBM46Q8TBY0 533 aaKnown RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 FAM71BQ8TC56 605 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ARL8AQ96BM9 186 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ZDHHC15Q96MV8 337 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 AP1M1Q9BXS5 423 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 LRRC27Q9C0I9 530 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 EPB41L5Q9HCM4 733 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 FBXO28Q9NVF7 368 aa10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ARMCX3Q9UH62 379 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 ZBTB12Q9Y330 459 aaPredicted RBP10.05□□□□□ -0.8
SYDE2-201ENST00000234668 PLIN4Q96Q06 1357 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GOLGA6BA6NDN3 693 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 BMP3P12645 472 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 DACT2Q5SW24 774 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 C8orf74Q6P047 294 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 LEKR1Q6ZMV7 388 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 ADAT2Q7Z6V5 191 aaKnown RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 MYCT1Q8N699 235 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 ELMO3Q96BJ8 720 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 CCDC17Q96LX7 622 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 EIF2AK1Q9BQI3 630 aaKnown RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 CHORDC1Q9UHD1 332 aaPredicted RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 KCNK3O14649 394 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 RAD17O75943 681 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 ALDH1B1P30837 517 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 CYP2J2P51589 502 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 USP11P51784 963 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 ORC2Q13416 577 aaPredicted RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 KNOP1Q1ED39 458 aaKnown RBP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 MAP9Q49MG5 647 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 ZNF662Q6ZS27 426 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYDE2-201ENST00000234668 DYDC2Q96IM9 177 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 ZBTB21Q9ULJ3 1066 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 KDM3AQ9Y4C1 1321 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 GFPT2O94808 682 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 KRT14P02533 472 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 UCHL3P15374 230 aa10.04□□□□□ -0.8
SYDE2-201ENST00000234668 PON1P27169 355 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms