RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 DPY19L2P1Q6NXN4 242 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 CATSPER3Q86XQ3 398 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 MKL1Q969V6 931 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 INPP4AQ96PE3 977 aaPredicted RBP17.88■□□□□ 0.45
LTBR-201ENST00000228918 P2RX7Q99572 595 aaKnown RBP17.88■□□□□ 0.45
LTBR-201ENST00000228918 ZHX3Q9H4I2 956 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 ADAMTS1Q9UHI8 967 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 HDAC9Q9UKV0 1011 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 TRAF3IP3Q9Y228 551 aa17.88■□□□□ 0.45
LTBR-201ENST00000228918 OPA1O60313 960 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 EPB41P11171 864 aaKnown RBP17.87■□□□□ 0.45
LTBR-201ENST00000228918 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
LTBR-201ENST00000228918 ARHGAP4P98171 946 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 GIT2Q14161 759 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 ALS2CLQ60I27 953 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 FRMD5Q7Z6J6 570 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 ZFPM1Q8IX07 1006 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 IFT20Q8IY31 132 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 ZFP91Q96JP5 570 aaPredicted RBP17.87■□□□□ 0.45
LTBR-201ENST00000228918 GLI1P08151 1106 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 PPFIA1Q13136 1202 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 SHROOM1Q2M3G4 852 aaPredicted RBP17.87■□□□□ 0.45
LTBR-201ENST00000228918 SLFN13Q68D06 897 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 EPM2AIP1Q7L775 607 aaPredicted RBP17.87■□□□□ 0.45
LTBR-201ENST00000228918 C10orf67Q8IYJ2 551 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 PLCB1Q9NQ66 1216 aa17.87■□□□□ 0.45
LTBR-201ENST00000228918 BTNL10A8MVZ5 291 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 TBX3O15119 743 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 RAD21O60216 631 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 HEXIM1O94992 359 aaKnown RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 DNA2P51530 1060 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 PSMC6P62333 389 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 IRX3P78415 501 aaPredicted RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 ENOX2Q16206 610 aaKnown RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 DOK7Q18PE1 504 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 PRR16Q569H4 304 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 SFR1Q86XK3 245 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 SYT2Q8N9I0 419 aaPredicted RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 ERMNQ8TAM6 284 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 REEP2Q9BRK0 252 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 PLEKHA4Q9H4M7 779 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 NYAP2Q9P242 653 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 PACSIN2Q9UNF0 486 aaPredicted RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 HSF2BPO75031 334 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 ACTN1P12814 892 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 RPA1P27694 616 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 HOXD13P35453 343 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 KNOP1Q1ED39 458 aaKnown RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 Q4G0T1 1027 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 IRF2BP2Q7Z5L9 587 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 LENG9Q96B70 501 aa17.86■□□□□ 0.45
LTBR-201ENST00000228918 ARMCX3Q9UH62 379 aaPredicted RBP17.86■□□□□ 0.45
LTBR-201ENST00000228918 FAM196BA6NMK8 535 aa17.85■□□□□ 0.45
LTBR-201ENST00000228918 AFPP02771 609 aaKnown RBP17.85■□□□□ 0.45
LTBR-201ENST00000228918 SLC9A1P19634 815 aa17.85■□□□□ 0.45
LTBR-201ENST00000228918 CARSP49589 748 aaKnown RBP17.85■□□□□ 0.45
LTBR-201ENST00000228918 PTK2Q05397 1052 aa17.85■□□□□ 0.45
LTBR-201ENST00000228918 PABPC4Q13310 644 aaKnown RBP eCLIP17.85■□□□□ 0.45
LTBR-201ENST00000228918 GBP6Q6ZN66 633 aa17.85■□□□□ 0.45
LTBR-201ENST00000228918 RUFY1Q96T51 708 aa17.85■□□□□ 0.45
LTBR-201ENST00000228918 ZSCAN5CA6NGD5 496 aaPredicted RBP17.84■□□□□ 0.45
LTBR-201ENST00000228918 MEIS1O00470 390 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 CLSTN1O94985 981 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 UCHL3P15374 230 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 CRKP46108 304 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 PAK2Q13177 524 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 TTMPQ5BVD1 217 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 C10orf76Q5T2E6 689 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 MCTP2Q6DN12 878 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 ZNF571Q7Z3V5 609 aaPredicted RBP17.84■□□□□ 0.45
LTBR-201ENST00000228918 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
LTBR-201ENST00000228918 ZIM3Q96PE6 472 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 DNM3Q9UQ16 869 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 PDXKO00764 312 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 IRAK1P51617 712 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 GUCY2DQ02846 1103 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 ARL8AQ96BM9 186 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 SPAG5Q96R06 1193 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 KRT12Q99456 494 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 EPB41L5Q9HCM4 733 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 NFU1Q9UMS0 254 aa17.84■□□□□ 0.45
LTBR-201ENST00000228918 ESYT3A0FGR9 886 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 CES2O00748 559 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 CALUO43852 315 aaPredicted RBP17.83■□□□□ 0.45
LTBR-201ENST00000228918 MYBP10242 640 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 EXOC3L4Q17RC7 722 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 BMT2Q1RMZ1 405 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 CERKLQ49MI3 558 aaPredicted RBP17.83■□□□□ 0.45
LTBR-201ENST00000228918 USP38Q8NB14 1042 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 AMNQ9BXJ7 453 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 CAPS2Q9BXY5 557 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 YY1AP1Q9H869 796 aa17.83■□□□□ 0.45
LTBR-201ENST00000228918 BZW2Q9Y6E2 419 aaKnown RBP17.83■□□□□ 0.45
LTBR-201ENST00000228918 GRIN2DO15399 1336 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 FAM86B1E9PN63 330 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 FAM86B2P0C5J1 330 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 XRCC5P13010 732 aaKnown RBP17.83■□□□□ 0.44
LTBR-201ENST00000228918 PON1P27169 355 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms