RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 WNT10BO00744 389 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 ATP6V1G2O95670 118 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 PRLRP16471 622 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 TNNC1P63316 161 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 ITGB3BPQ13352 177 aaPredicted RBP11.24□□□□□ -0.61
CHERP-201ENST00000198939 ACCSLQ4AC99 568 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 MFSD6Q6ZSS7 791 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 TBC1D1Q86TI0 1168 aaPredicted RBP11.24□□□□□ -0.61
CHERP-201ENST00000198939 SULF1Q8IWU6 871 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 P3H4Q92791 437 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 STAMBPL1Q96FJ0 436 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 PRMT6Q96LA8 375 aaPredicted RBP11.24□□□□□ -0.61
CHERP-201ENST00000198939 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 MAST2Q6P0Q8 1798 aa11.24□□□□□ -0.61
CHERP-201ENST00000198939 C6orf89Q6UWU4 347 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 LCORLQ8N3X6 602 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 TGFBRAP1Q8WUH2 860 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 ZBTB10Q96DT7 871 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 DYNLL1P63167 89 aaKnown RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 KCNB1Q14721 858 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 CCDC197Q8NCU1 140 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 SH3RF3Q8TEJ3 882 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 ZBED3Q96IU2 234 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 SELENOSQ9BQE4 189 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 SH2D4AQ9H788 454 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 MMRN2Q9H8L6 949 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 LUC7LQ9NQ29 371 aaKnown RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 NOVA2Q9UNW9 492 aaKnown RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 MYH8P13535 1937 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 TIAM2Q8IVF5 1701 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 PCP11498 1178 aaKnown RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 LIFRP42702 1097 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 CTDSPL2Q05D32 466 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 PSMD2Q13200 908 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 PTGDRQ13258 359 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 TTC38Q5R3I4 469 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 SGMS1Q86VZ5 419 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 FAM114A1Q8IWE2 563 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 IFNL3Q8IZI9 196 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 C3orf20Q8ND61 904 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 ZNF483Q8TF39 744 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 FAM151AQ8WW52 585 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
CHERP-201ENST00000198939 ZSWIM5Q9P217 1185 aa11.23□□□□□ -0.61
CHERP-201ENST00000198939 SMIM24O75264 130 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 RTN2O75298 545 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 ANP32DO95626 131 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 KIF11P52732 1056 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 SUPT20HL1Q3ZLR7 823 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 EAPPQ56P03 285 aaPredicted RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 OR2W6PQ8NHA6 318 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 NOP53Q9NZM5 478 aaKnown RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 FOXP2O15409 715 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 PPP2R2AP63151 447 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 MEA1Q16626 185 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 KRT71Q3SY84 523 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 CRACR2BQ8N4Y2 399 aaPredicted RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 KRT23Q9C075 422 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 NUCKS1Q9H1E3 243 aaKnown RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 RRAGCQ9HB90 399 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 RNF14Q9UBS8 474 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 STK38LQ9Y2H1 464 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 DOCK2Q92608 1830 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 CLSTN1O94985 981 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 TNFRSF8P28908 595 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 MCM7P33993 719 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 EIF4A3P38919 411 aaKnown RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 KLK7P49862 253 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 RHBDL3P58872 404 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 ELF3P78545 371 aaPredicted RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 XRCC4Q13426 336 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 QPCTQ16769 361 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 SBK1Q52WX2 424 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 CD302Q8IX05 232 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 CCDC155Q8N6L0 562 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 CCHCR1Q8TD31 782 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 ZNF384Q8TF68 577 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 TMBIM4Q9HC24 238 aa11.22□□□□□ -0.61
CHERP-201ENST00000198939 FAM207AQ9NSI2 230 aaPredicted RBP11.22□□□□□ -0.61
CHERP-201ENST00000198939 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms