RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.78■■■□□ 2.2
RTN4R-201ENST00000043402 ICAM1P05362 532 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 NR2F2P24468 414 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 ZNF280AP59817 542 aaPredicted RBP28.77■■■□□ 2.2
RTN4R-201ENST00000043402 KCTD17Q8N5Z5 321 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 EHMT1Q9H9B1 1298 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 CCPG1Q9ULG6 757 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 KRT86O43790 486 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 GAS7O60861 476 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 IPO7O95373 1038 aaKnown RBP28.77■■■□□ 2.2
RTN4R-201ENST00000043402 HSD17B4P51659 736 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 PRELPP51888 382 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 CEP112Q8N8E3 955 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 COL20A1Q9P218 1284 aa28.77■■■□□ 2.2
RTN4R-201ENST00000043402 WRAP73Q9P2S5 460 aaPredicted RBP28.77■■■□□ 2.2
RTN4R-201ENST00000043402 CETN3O15182 167 aa28.76■■■□□ 2.19
RTN4R-201ENST00000043402 PDXDC1Q6P996 788 aa28.76■■■□□ 2.19
RTN4R-201ENST00000043402 ZNF577Q9BSK1 485 aa28.76■■■□□ 2.19
RTN4R-201ENST00000043402 FAM53CQ9NYF3 392 aa28.76■■■□□ 2.19
RTN4R-201ENST00000043402 SFI1A8K8P3 1242 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 EIF4A3P38919 411 aaKnown RBP28.75■■■□□ 2.19
RTN4R-201ENST00000043402 CRACR2AQ9BSW2 395 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 EDEM3Q9BZQ6 932 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 UNC45AQ9H3U1 944 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 BRCA1P38398 1863 aaKnown RBP28.75■■■□□ 2.19
RTN4R-201ENST00000043402 ASTN2O75129 1339 aaPredicted RBP28.75■■■□□ 2.19
RTN4R-201ENST00000043402 NFIBO00712 420 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 ENC1O14682 589 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 VAV2P52735 878 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 APBA1Q02410 837 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 TNIP1Q15025 636 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 BMT2Q1RMZ1 405 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 B3GNT9Q6UX72 402 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 C1orf186Q6ZWK4 172 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 PRPF38AQ8NAV1 312 aaKnown RBP28.75■■■□□ 2.19
RTN4R-201ENST00000043402 CLEC4DQ8WXI8 215 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 MYO6Q9UM54 1294 aa28.75■■■□□ 2.19
RTN4R-201ENST00000043402 KIF11P52732 1056 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 KCNA1Q09470 495 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 CACNA2D4Q7Z3S7 1137 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 PURBQ96QR8 312 aaKnown RBP28.74■■■□□ 2.19
RTN4R-201ENST00000043402 NLRC4Q9NPP4 1024 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 TBCAO75347 108 aaKnown RBP28.74■■■□□ 2.19
RTN4R-201ENST00000043402 LCA5LO95447 670 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 HOOK2Q96ED9 719 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 PARD6BQ9BYG5 372 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 ARGLU1Q9NWB6 273 aaPredicted RBP28.74■■■□□ 2.19
RTN4R-201ENST00000043402 HDAC6Q9UBN7 1215 aa28.74■■■□□ 2.19
RTN4R-201ENST00000043402 PDXKO00764 312 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 WDR46O15213 610 aaKnown RBP28.73■■■□□ 2.19
RTN4R-201ENST00000043402 ITGB5P18084 799 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 TRAPPC11Q7Z392 1133 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 MXRA8Q9BRK3 442 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 LSM14BQ9BX40 385 aaKnown RBP28.73■■■□□ 2.19
RTN4R-201ENST00000043402 OLFML3Q9NRN5 406 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 CEP72Q9P209 647 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 FAM184BQ9ULE4 1060 aa28.73■■■□□ 2.19
RTN4R-201ENST00000043402 IPO5O00410 1097 aaKnown RBP28.72■■■□□ 2.19
RTN4R-201ENST00000043402 ZRANB2O95218 330 aaKnown RBP eCLIP28.72■■■□□ 2.19
RTN4R-201ENST00000043402 GCNT3O95395 438 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 ATP1A1P05023 1023 aaKnown RBP28.72■■■□□ 2.19
RTN4R-201ENST00000043402 SETQ01105 290 aaPredicted RBP28.72■■■□□ 2.19
RTN4R-201ENST00000043402 KCNH2Q12809 1159 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 SPA17Q15506 151 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 WHAMMP3Q1A5X7 153 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 HGSNATQ68CP4 663 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 SAMD7Q7Z3H4 446 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 KIAA1683Q9H0B3 1180 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 ASTN1O14525 1302 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 ASTE1Q2TB18 679 aaPredicted RBP28.72■■■□□ 2.19
RTN4R-201ENST00000043402 IL31RAQ8NI17 732 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 LPAR1Q92633 364 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 WDR11Q9BZH6 1224 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 PCDHA13Q9Y5I0 950 aa28.72■■■□□ 2.19
RTN4R-201ENST00000043402 TNFAIP1Q13829 316 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 ARHGAP27Q6ZUM4 889 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 IFIH1Q9BYX4 1025 aaKnown RBP28.71■■■□□ 2.19
RTN4R-201ENST00000043402 PRDM10Q9NQV6 1147 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 FHOD1Q9Y613 1164 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 RPTORQ8N122 1335 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 TLR2O60603 784 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 KIF5AQ12840 1032 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 FRMD5Q7Z6J6 570 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 CPXCR1Q8N123 301 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 EHBP1Q8NDI1 1231 aa28.71■■■□□ 2.19
RTN4R-201ENST00000043402 TYW1Q9NV66 732 aaKnown RBP28.71■■■□□ 2.19
RTN4R-201ENST00000043402 MACROD2A1Z1Q3 448 aa28.7■■■□□ 2.19
RTN4R-201ENST00000043402 AKAP3O75969 853 aa28.7■■■□□ 2.19
RTN4R-201ENST00000043402 POLR2FP61218 127 aaKnown RBP28.7■■■□□ 2.19
RTN4R-201ENST00000043402 EPHA7Q15375 998 aa28.7■■■□□ 2.19
RTN4R-201ENST00000043402 TMCO3Q6UWJ1 677 aa28.7■■■□□ 2.19
RTN4R-201ENST00000043402 TEKT3Q9BXF9 490 aa28.7■■■□□ 2.19
RTN4R-201ENST00000043402 DEF6Q9H4E7 631 aa28.7■■■□□ 2.19
RTN4R-201ENST00000043402 CALUO43852 315 aaPredicted RBP28.69■■■□□ 2.18
RTN4R-201ENST00000043402 SEC31AO94979 1220 aaKnown RBP28.69■■■□□ 2.18
RTN4R-201ENST00000043402 GAP43P17677 238 aa28.69■■■□□ 2.18
RTN4R-201ENST00000043402 PAPD7Q5XG87 772 aaKnown RBP28.69■■■□□ 2.18
RTN4R-201ENST00000043402 MICALL2Q8IY33 904 aa28.69■■■□□ 2.18
RTN4R-201ENST00000043402 IKZF4Q9H2S9 585 aa28.69■■■□□ 2.18
RTN4R-201ENST00000043402 ANKZF1Q9H8Y5 726 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms