RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Usb1Q91W78 267 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 PlgrktQ9D3P8 147 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 PycardQ9EPB4 193 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Itgb1bp2Q9R000 350 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Cacna1sQ02789 1880 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Parp2O88554 559 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Nol4P60954 483 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Shox2P70390 331 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Ccdc42Q5SV66 316 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Klhdc10Q6PAR0 439 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Mxd3Q80US8 206 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Klhl7Q8BUL5 586 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Rassf9Q8K342 435 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Mfap3Q922T2 349 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Dynll2Q9D0M5 89 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Tulp1Q9Z273 543 aa12.53□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Sh3tc1G3X9F6 1346 aa12.52□□□□□ -0.4
Sdc1-201ENSMUST00000020911 Trappc11B2RXC1 1133 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 ErmardE9Q048 622 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Mdh1bQ5F204 500 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Pus7lQ8CE46 702 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Xpo6Q924Z6 1125 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Dydc2Q9D3X8 139 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Itga2bQ9QUM0 1033 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gbp2Q9Z0E6 589 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gm28919A0A087WP35 240 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Phkg1P07934 388 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Dok7Q18PE0 504 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 C87499Q3UX49 493 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tcp10aQ80W76 438 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Daam1Q8BPM0 1077 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Bicd1Q8BR07 835 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 IrgcQ8C262 412 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 MlphQ91V27 590 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Usp11Q99K46 921 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tsc1Q9EP53 1161 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kat2aQ9JHD2 830 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Angptl3Q9R182 455 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nhsl1Q8CAF4 1587 aa12.52□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nhej1Q3KNJ2 295 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ckap2Q3V1H1 664 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ces3aQ63880 571 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Adck2Q6NSR3 617 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Rbm26Q6NZN0 1012 aaKnown RBP12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Afg3l2Q8JZQ2 802 aaKnown RBP12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Shtn1Q8K2Q9 631 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gga1Q8R0H9 635 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ces3bQ8VCU1 571 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kndc1Q0KK55 1742 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 NesQ6P5H2 1864 aaKnown RBP12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kat6bQ8BRB7 1872 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Rgsl1H3BL40 1073 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tmed1Q3V009 227 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Cyp4f39Q8BGU0 532 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ubap1Q8BH48 502 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Nlrp4aQ8BU40 982 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ttc22Q8C159 568 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Snrnp27Q8K194 155 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Stn1Q8K2X3 378 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Mettl13Q91YR5 698 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kif17Q99PW8 1038 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 QpctQ9CYK2 362 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gm36210A0A1B0GS00 229 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tbc1d8bA3KGB4 1114 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ccdc144bE9PVZ3 520 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Kif23E9Q5G3 953 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 MybP06876 636 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Mx1P09922 631 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Aak1Q3UHJ0 959 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Olfr121Q5CZY0 321 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Slc27a1Q60714 646 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Pramel6Q810Y9 485 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 QarsQ8BML9 775 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sumf1Q8R0F3 372 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Wasf1Q8R5H6 559 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Copb1Q9JIF7 953 aa12.51□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gm4981Q3ULJ8 291 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Asic3Q6X1Y6 530 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Sval3Q76I99 144 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 TwistnbQ78WZ7 330 aaKnown RBP12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Slitrk3Q810B9 980 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 CpzQ8R4V4 654 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Gpr108Q91WD0 569 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Prkag2Q91WG5 566 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ptdss1Q99LH2 473 aaKnown RBP12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Ndufb9Q9CQJ8 179 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 AticQ9CWJ9 592 aaKnown RBP12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Znf654Q9DAU9 571 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tmem191cQ9JJB1 302 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Atp6v1c1Q9Z1G3 382 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Wdr19Q3UGF1 1341 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Zfyve9A2A8R0 1397 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 HmmrQ00547 794 aaKnown RBP12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Soat1Q61263 540 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 N4bp1Q6A037 893 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Atxn2lQ7TQH0 1049 aaKnown RBP12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Slc13a4Q8BZ82 625 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Pspc1Q8R326 523 aaKnown RBP12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tmem98Q91X86 226 aa12.5□□□□□ -0.41
Sdc1-201ENSMUST00000020911 Tex13bQ99MW5 186 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms