RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SFMBT2Q5VUG0 894 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 HGSNATQ68CP4 663 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 ARMC2Q8NEN0 867 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 GDAP1Q8TB36 358 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 XPO6Q96QU8 1125 aaKnown RBP15.03■□□□□ -0
SCARB2-227ENST00000640957 SPAG5Q96R06 1193 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.03■□□□□ -0
SCARB2-227ENST00000640957 IGF2BP3O00425 579 aaKnown RBP eCLIP15.03■□□□□ -0
SCARB2-227ENST00000640957 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
SCARB2-227ENST00000640957 CREB1P16220 341 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 LONP1P36776 959 aaKnown RBP15.03■□□□□ -0
SCARB2-227ENST00000640957 HSPA9P38646 679 aaKnown RBP15.03■□□□□ -0
SCARB2-227ENST00000640957 ALDH5A1P51649 535 aaPredicted RBP15.03■□□□□ -0
SCARB2-227ENST00000640957 ERFEQ4G0M1 354 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 SLC9C1Q4G0N8 1177 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 DYDC1Q8WWB3 177 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 NGLY1Q96IV0 654 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 ERGIC2Q96RQ1 377 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 TCP11L1Q9NUJ3 509 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 MCM9Q9NXL9 1143 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 SNX24Q9Y343 169 aa15.03■□□□□ -0
SCARB2-227ENST00000640957 RTCBQ9Y3I0 505 aaKnown RBP15.03■□□□□ -0
SCARB2-227ENST00000640957 POTEMA6NI47 508 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 SPDYE3A6NKU9 549 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 MGRN1O60291 552 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 ABCB4P21439 1286 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 PDXDC1Q6P996 788 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 PSMD1Q99460 953 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 NOC2LQ9Y3T9 749 aaKnown RBP15.02■□□□□ -0
SCARB2-227ENST00000640957 ABCC12Q96J65 1359 aa15.02■□□□□ -0
SCARB2-227ENST00000640957 KLRK1P26718 216 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 SEPT14Q6ZU15 432 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 C3orf67Q6ZVT6 689 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 METTL13Q8N6R0 699 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 DHTKD1Q96HY7 919 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-227ENST00000640957 NUDT12Q9BQG2 462 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 ADAM33Q9BZ11 813 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 PLCB1Q9NQ66 1216 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 ANKIB1Q9P2G1 1089 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 FBXO3Q9UK99 471 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 BICDL2A1A5D9 508 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 MYMKA6NI61 221 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 A6NNZ2 444 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 MAP3K13O43283 966 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 XRCC4Q13426 336 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 ITPK1Q13572 414 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 TUBB8Q3ZCM7 444 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 TMED8Q6PL24 325 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-227ENST00000640957 VGLL2Q8N8G2 317 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 CCDC47Q96A33 483 aaKnown RBP15.02□□□□□ -0.01
SCARB2-227ENST00000640957 DYNLL2Q96FJ2 89 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 MKNK2Q9HBH9 465 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 KBTBD4Q9NVX7 518 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 BIN2Q9UBW5 565 aaPredicted RBP15.02□□□□□ -0.01
SCARB2-227ENST00000640957 C15orf41Q9Y2V0 281 aa15.02□□□□□ -0.01
SCARB2-227ENST00000640957 PPIP5K2O43314 1243 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 TNIP1Q15025 636 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 GJB7Q6PEY0 223 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 SEPT11Q9NVA2 429 aaKnown RBP15.01□□□□□ -0.01
SCARB2-227ENST00000640957 SLIT3O75094 1523 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 NPHP3-ACAD11A0A0J9YXS1 232 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 USP17L3A6NCW0 530 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 USP17L4A6NCW7 530 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 PRLRP16471 622 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 FGFR4P22455 802 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 EPS15P42566 896 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 ALX1Q15699 326 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 USP17L1Q7RTZ2 530 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 DZIP1Q86YF9 867 aaKnown RBP15.01□□□□□ -0.01
SCARB2-227ENST00000640957 FAM114A1Q8IWE2 563 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 EPS8L3Q8TE67 593 aaKnown RBP15.01□□□□□ -0.01
SCARB2-227ENST00000640957 ISCUQ9H1K1 167 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 SPATS2LQ9NUQ6 558 aaKnown RBP15.01□□□□□ -0.01
SCARB2-227ENST00000640957 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
SCARB2-227ENST00000640957 G3BP2Q9UN86 482 aaKnown RBP15.01□□□□□ -0.01
SCARB2-227ENST00000640957 ECM29Q5VYK3 1845 aa15.01□□□□□ -0.01
SCARB2-227ENST00000640957 KRT16P08779 473 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 MEI1Q5TIA1 1274 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 RUFY4Q6ZNE9 571 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 CELF1Q92879 486 aaKnown RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 SAAL1Q96ER3 474 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 PIDD1Q9HB75 910 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 FGFR1OP2Q9NVK5 253 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 TMEM260Q9NX78 707 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 RTL9Q8NET4 1388 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 ORC4O43929 436 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 FGGP02679 453 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 ARID4AP29374 1257 aaPredicted RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 PLCB4Q15147 1175 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 NBPF5PQ86XG9 351 aaPredicted RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 LRRC45Q96CN5 670 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 ECT2Q9H8V3 914 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 INTS9Q9NV88 658 aaKnown RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 SAMD15Q9P1V8 674 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 COL5A2P05997 1499 aaPredicted RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 KRT13P13646 458 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 IL6STP40189 918 aaPredicted RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 SESN3P58005 492 aa15□□□□□ -0.01
SCARB2-227ENST00000640957 NKX1-1Q15270 411 aaPredicted RBP15□□□□□ -0.01
SCARB2-227ENST00000640957 TCERG1LQ5VWI1 586 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms