RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 CACNA1HO95180 2353 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TLDC2A0PJX2 215 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 GOLGA8CPA6NN73 597 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TIMP1P01033 207 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 ATP5JP18859 108 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 PSMC6P62333 389 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TNFAIP2Q03169 654 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 PPIGQ13427 754 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 L1TD1Q5T7N2 865 aaKnown RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 ZSCAN25Q6NSZ9 544 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 KCTD1Q719H9 257 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 RASGRP2Q7LDG7 609 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 PCSK9Q8NBP7 692 aaKnown RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 SCLYQ96I15 445 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 AGBL1Q96MI9 1066 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 AP5M1Q9H0R1 490 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 NKX2-4Q9H2Z4 354 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 HIPK3Q9H422 1215 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 CAPN10Q9HC96 672 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 ARPP21Q9UBL0 812 aaPredicted RBP5.63□□□□□ -1.51
LINC00550-201ENST00000629293 VTI1BQ9UEU0 232 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 MCM3APO60318 1980 aa5.63□□□□□ -1.51
LINC00550-201ENST00000629293 TLR3O15455 904 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 GPAA1O43292 621 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 DUSP11O75319 330 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 MYOGP15173 224 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 SLC1A4P43007 532 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 CCDC96Q2M329 555 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TMEM240Q5SV17 173 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 SLFN13Q68D06 897 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 MFSD5Q6N075 450 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 FBXO16Q8IX29 292 aaPredicted RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 OSBP2Q969R2 916 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 GPATCH3Q96I76 525 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 HAUS7Q99871 368 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TRPV6Q9H1D0 765 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 ABHD16BQ9H3Z7 469 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 RNF146Q9NTX7 359 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TFF2Q03403 129 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 UBE3CQ15386 1083 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 CASC1Q6TDU7 716 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 C16orf59Q7L2K0 433 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 STRBPQ96SI9 672 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 PDGFCQ9NRA1 345 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 THEGQ9P2T0 379 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 DMGDHQ9UI17 866 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TBX21Q9UL17 535 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TCF20Q9UGU0 1960 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 A0A0U1RQG5 324 aaPredicted RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 ARVCFO00192 962 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 RFXAPO00287 272 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 ERC2O15083 957 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 RANBP6O60518 1105 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 RAB11FIP3O75154 756 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 REC8O95072 547 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 FGBP02675 491 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 CYP2C9P11712 490 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 BMP3P12645 472 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 ADGRE1Q14246 886 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TMEM63BQ5T3F8 832 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 PPP1R26Q5T8A7 1209 aaPredicted RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 KIAA1211Q6ZU35 1233 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TLK2Q86UE8 772 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 ALDH16A1Q8IZ83 802 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 EDEM1Q92611 657 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 UHRF1Q96T88 793 aaPredicted RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 NAPBQ9H115 298 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 MTIF3Q9H2K0 278 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
LINC00550-201ENST00000629293 ZNFX1Q9P2E3 1918 aaKnown RBP5.62□□□□□ -1.51
LINC00550-201ENST00000629293 TSPY2A6NKD2 308 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 RNF223E7ERA6 249 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TNFRSF10AO00220 468 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 EIF1AYO14602 144 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 PTMSP20962 102 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 COPB2P35606 906 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 SLC16A2P36021 539 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 STAT2P52630 851 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TFAP4Q01664 338 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 C1orf53Q5VUE5 145 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 PSRC1Q6PGN9 363 aaPredicted RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ERMP1Q7Z2K6 904 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ANKRD33Q7Z3H0 272 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 REPS2Q8NFH8 660 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 TRERF1Q96PN7 1200 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 GBP4Q96PP9 640 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 FSD1Q9BTV5 496 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 EPB41L4AQ9HCS5 686 aaPredicted RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 A1CFQ9NQ94 594 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 ECHDC1Q9NTX5 307 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 MTUS1Q9ULD2 1270 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 DIS3Q9Y2L1 958 aaKnown RBP5.61□□□□□ -1.51
LINC00550-201ENST00000629293 MROH7Q68CQ1 1323 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 MAST2Q6P0Q8 1798 aa5.61□□□□□ -1.51
LINC00550-201ENST00000629293 PTPDC1A2A3K4 754 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms