RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 DGKDQ16760 1214 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 BEST2Q8NFU1 509 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 AGTPBP1Q9UPW5 1226 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 AFG3L2Q9Y4W6 797 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PITPNM2Q9BZ72 1349 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 RSPH10B2B2RC85 870 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 STAM2O75886 525 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 RSPH10BP0C881 870 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 TBC1D8BQ0IIM8 1120 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PDIA6Q15084 440 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 GLB1LQ6UWU2 654 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ATOH1Q92858 354 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 KIAA1143Q96AT1 154 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 PPP1R16AQ96I34 528 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 MTG1Q9BT17 334 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 TNFSF13BQ9Y275 285 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 DCTN2Q13561 401 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 MMS19Q96T76 1030 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 INPP5FQ9Y2H2 1132 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ATRNO75882 1429 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 LRRIQ4A6NIV6 560 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 GCKRQ14397 625 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PRMT6Q96LA8 375 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 GCOM2Q9BZD3 368 aaPredicted RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 NDEL1Q9GZM8 345 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 BICDL2A1A5D9 508 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 RRN3P2A6NIE6 340 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SYNCRIPO60506 623 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 NCAPHQ15003 741 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 BCAR3O75815 825 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 SLFN14P0C7P3 912 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CKBP12277 381 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ABCB4P21439 1286 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 ABL2P42684 1182 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CRKP46108 304 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CCAR2Q8N163 923 aaKnown RBP3.67□□□□□ -1.82
LPP-220ENST00000617246 SNX25Q9H3E2 840 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 TTLL3Q9Y4R7 772 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 C10orf71Q711Q0 1435 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 H7C1W4 665 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 CYP2B6P20813 491 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PHKA1P46020 1223 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 JAK3P52333 1124 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 PPFIBP2Q8ND30 876 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 APBA2Q99767 749 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 EMILIN1Q9Y6C2 1016 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 LY75O60449 1722 aa3.67□□□□□ -1.82
LPP-220ENST00000617246 TDRD15B5MCY1 1934 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 LAMTOR5O43504 91 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 RPS6KA5O75582 802 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PSMA3P25788 255 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MTSS1LQ765P7 747 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SLC44A5Q8NCS7 719 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 CTNNBL1Q8WYA6 563 aaPredicted RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 LPAR1Q92633 364 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ACDQ96AP0 544 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 DNAJC1Q96KC8 554 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.66□□□□□ -1.82
LPP-220ENST00000617246 SPATA16Q9BXB7 569 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ANKFY1Q9P2R3 1169 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 TADA2AO75478 443 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 TTLL1O95922 423 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 FGBP02675 491 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MCAMP43121 646 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ASIC1P78348 528 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ANKLE1Q8NAG6 615 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 IGFLR1Q9H665 355 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 DDX39AO00148 427 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 PQBP1O60828 265 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 PIK3AP1Q6ZUJ8 805 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 TRIM50Q86XT4 487 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 FOXP4Q8IVH2 680 aaPredicted RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 GLTPD2A6NH11 291 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PRPSAP1Q14558 356 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 LRRC31Q6UY01 552 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 FIBCD1Q8N539 461 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ZNF280CQ8ND82 737 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SLC4A9Q96Q91 983 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 KCPQ6ZWJ8 1503 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SYPP08247 313 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 USP4Q13107 963 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 CHST13Q8NET6 341 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 KLRG1Q96E93 195 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 C8orf76Q96K31 380 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 NLNQ9BYT8 704 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 EXO5Q9H790 373 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 AP1G2O75843 785 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 LSP1P33241 339 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MCM4P33991 863 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MRPS31Q92665 395 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 DNAJC11Q9NVH1 559 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 GPR182O15218 404 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 MED7O43513 233 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 CCNB2O95067 398 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 SLC2A4P14672 509 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PABPC1LQ4VXU2 614 aaKnown RBP3.66□□□□□ -1.82
LPP-220ENST00000617246 GDAP1Q8TB36 358 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 XPNPEP3Q9NQH7 507 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 PFDN4Q9NQP4 134 aa3.66□□□□□ -1.82
LPP-220ENST00000617246 ZHX2Q9Y6X8 837 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms