RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PDXDC2PQ6P474 469 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 CCDC155Q8N6L0 562 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 UBL4BQ8N7F7 174 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 NKX2-3Q8TAU0 364 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 AGPAT5Q9NUQ2 364 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 LRRC37A3O60309 1634 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 KCPQ6ZWJ8 1503 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 ANKRD62A6NC57 917 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 PAK2Q13177 524 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 BANK1Q8NDB2 785 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 ATRIPQ8WXE1 791 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 POMGNT1Q8WZA1 660 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 CEP63Q96MT8 703 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 SERPINA10Q9UK55 444 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 PRR12Q9ULL5 1215 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 CCDC151A5D8V7 595 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 PPP1R7Q15435 360 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 CEP170P1Q96L14 293 aa14.43□□□□□ -0.1
PPP4R3B-206ENST00000616407 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 LIG4P49917 911 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 PRELPP51888 382 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 KNOP1Q1ED39 458 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 GSTA5Q7RTV2 222 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 PRMT6Q96LA8 375 aaPredicted RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 PDE11AQ9HCR9 933 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 DDX4Q9NQI0 724 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 PODXL2Q9NZ53 605 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 FEM1BQ9UK73 627 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 DDTLA6NHG4 134 aaPredicted RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 FERP16591 822 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 SPP2Q13103 211 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 NAALADL2Q58DX5 795 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 CEP83Q9Y592 693 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 ABCB11O95342 1321 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 HNRNPDLO14979 420 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 N4BP1O75113 896 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 NR3C1P04150 777 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 HOXA10P31260 410 aaPredicted RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 GUCY2FP51841 1108 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 KDM3BQ7LBC6 1761 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 ADAT2Q7Z6V5 191 aaKnown RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 LDHDQ86WU2 507 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 ACCSQ96QU6 501 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 RIOX1Q9H6W3 641 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 MLXIPQ9HAP2 919 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 GINS2Q9Y248 185 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 TACC3Q9Y6A5 838 aa14.42□□□□□ -0.1
PPP4R3B-206ENST00000616407 GOLGA6CA6NDK9 693 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 GOLGA6DP0CG33 693 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 GBP2P32456 591 aaPredicted RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 FXR2P51116 673 aaKnown RBP eCLIP14.41□□□□□ -0.16e-10■□□□□ 9.7
PPP4R3B-206ENST00000616407 STYK1Q6J9G0 422 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 GADL1Q6ZQY3 521 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 NCAPG2Q86XI2 1143 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 PRPF38AQ8NAV1 312 aaKnown RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ANKS1AQ92625 1134 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ATP6V0A1Q93050 837 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZDHHC15Q96MV8 337 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 RMDN3Q96TC7 470 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 GOLGA6AQ9NYA3 693 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 UTP11Q9Y3A2 253 aaKnown RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 IPO5O00410 1097 aaKnown RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 KRIT1O00522 736 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 PPARDQ03181 441 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 TRPC3Q13507 836 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 HOOK3Q86VS8 718 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 SUGCTQ9HAC7 445 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZNF70Q9UC06 446 aaPredicted RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 MTRF1LQ9UGC7 380 aaKnown RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 SEPT9Q9UHD8 586 aaPredicted RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ITIH6Q6UXX5 1313 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 POLGP54098 1239 aaPredicted RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 C2orf54Q08AI8 447 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 CALCOCO2Q13137 446 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 RNF207Q6ZRF8 634 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 KBTBD4Q9NVX7 518 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 FAM237AA0A1B0GTK4 181 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 IVLP07476 585 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 GFPT1Q06210 699 aaPredicted RBP14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 SULF1Q8IWU6 871 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZNRF3Q9ULT6 936 aa14.41□□□□□ -0.1
PPP4R3B-206ENST00000616407 ZNF18P17022 549 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 BMP6P22004 513 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 RHBDL3P58872 404 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 MTMR1Q13613 665 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 CEP55Q53EZ4 464 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 ALKBH5Q6P6C2 394 aaKnown RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 CEP72Q9P209 647 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 PSMD14O00487 310 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 PNMA6AP0CW24 399 aaPredicted RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 RASA3Q14644 834 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 GRIPAP1Q4V328 841 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 NAA35Q5VZE5 725 aa14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
PPP4R3B-206ENST00000616407 CCDC114Q96M63 670 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms