RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 NBR1Q14596 966 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 HSDL1Q3SXM5 330 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 FAM160B1Q5W0V3 765 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 DTHD1Q6ZMT9 781 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 MIER3Q7Z3K6 550 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 RDM1Q8NG50 284 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 TNPO1Q92973 898 aaKnown RBP18.82■□□□□ 0.6
USHBP1-210ENST00000600286 GLT1D1Q96MS3 346 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 GPR20Q99678 358 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 KATNAL1Q9BW62 490 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 TTC12Q9H892 705 aaPredicted RBP18.82■□□□□ 0.6
USHBP1-210ENST00000600286 CHMP5Q9NZZ3 219 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 PCDHA10Q9Y5I2 948 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 STK24Q9Y6E0 443 aa18.82■□□□□ 0.6
USHBP1-210ENST00000600286 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 MYH7BA7E2Y1 1941 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 BACH1O14867 736 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 DHX15O43143 795 aaKnown RBP18.81■□□□□ 0.6
USHBP1-210ENST00000600286 ASGR1P07306 291 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 PRPHP41219 470 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 PKP1Q13835 747 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 SF3A1Q15459 793 aaKnown RBP18.81■□□□□ 0.6
USHBP1-210ENST00000600286 ARL6IP4Q66PJ3 421 aaKnown RBP18.81■□□□□ 0.6
USHBP1-210ENST00000600286 ERMNQ8TAM6 284 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 HAS1Q92839 578 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 GLG1Q92896 1179 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 MTG1Q9BT17 334 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-210ENST00000600286 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 ZNF215Q9UL58 517 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-210ENST00000600286 FRMPD3Q5JV73 1810 aa18.81■□□□□ 0.6
USHBP1-210ENST00000600286 CHMP2AO43633 222 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 DKC1O60832 514 aaKnown RBP eCLIP18.8■□□□□ 0.6
USHBP1-210ENST00000600286 TCF7P36402 384 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-210ENST00000600286 ACLYP53396 1101 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 CEBPZQ03701 1054 aaKnown RBP18.8■□□□□ 0.6
USHBP1-210ENST00000600286 STK38Q15208 465 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-210ENST00000600286 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
USHBP1-210ENST00000600286 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
USHBP1-210ENST00000600286 NECAB2Q7Z6G3 386 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 SEZ6LQ9BYH1 1024 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 TMEM60Q9H2L4 133 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 SMARCAD1Q9H4L7 1026 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 BCAS3Q9H6U6 928 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 KIAA1217Q5T5P2 1943 aa18.8■□□□□ 0.6
USHBP1-210ENST00000600286 WNT7AO00755 349 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 NCLP19338 710 aaKnown RBP18.79■□□□□ 0.6
USHBP1-210ENST00000600286 TECP42680 631 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 ATP2C1P98194 919 aaPredicted RBP18.79■□□□□ 0.6
USHBP1-210ENST00000600286 PPP2R5CQ13362 524 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 NCAPH2Q6IBW4 605 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 FAM173BQ6P4H8 233 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 PHF24Q9UPV7 400 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 LRRC37A2A6NM11 1700 aa18.79■□□□□ 0.6
USHBP1-210ENST00000600286 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 MYADML2A6NDP7 307 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 ATG7O95352 703 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 SUPT20HL2P0C7V6 817 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 PTGS1P23219 599 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 SLC26A2P50443 739 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 STAT5BP51692 787 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 CHMP4BP1P59074 171 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 KRT85P78386 507 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 PDIA5Q14554 519 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 HABP4Q5JVS0 413 aaKnown RBP18.78■□□□□ 0.6
USHBP1-210ENST00000600286 CXCL17Q6UXB2 119 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 ABHD15Q6UXT9 468 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 GJA10Q969M2 543 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 FERMT2Q96AC1 680 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 SENP6Q9GZR1 1112 aaPredicted RBP18.78■□□□□ 0.6
USHBP1-210ENST00000600286 C11orf49Q9H6J7 331 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 STARD7Q9NQZ5 370 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 ZNF302Q9NR11 478 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 TFIP11Q9UBB9 837 aaKnown RBP18.78■□□□□ 0.6
USHBP1-210ENST00000600286 CLIC4Q9Y696 253 aa18.78■□□□□ 0.6
USHBP1-210ENST00000600286 H3BRB1 525 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 CTAGE5O15320 804 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 LGALS2P05162 132 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 HOXD8P13378 290 aaPredicted RBP18.77■□□□□ 0.6
USHBP1-210ENST00000600286 DDIT3P35638 169 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 FXR2P51116 673 aaKnown RBP eCLIP18.77■□□□□ 0.6
USHBP1-210ENST00000600286 PURAQ00577 322 aaKnown RBP18.77■□□□□ 0.6
USHBP1-210ENST00000600286 EPHA7Q15375 998 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
USHBP1-210ENST00000600286 SWSAP1Q6NVH7 229 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 PDXDC2PQ6P474 469 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 PLPPR4Q7Z2D5 763 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 CKAP2LQ8IYA6 745 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 ATP6V0A1Q93050 837 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 USP28Q96RU2 1077 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 TUT1Q9H6E5 874 aaKnown RBP18.77■□□□□ 0.6
USHBP1-210ENST00000600286 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
USHBP1-210ENST00000600286 DNAH12Q6ZR08 3092 aa18.77■□□□□ 0.59
USHBP1-210ENST00000600286 A0A1W2PQ45 241 aaPredicted RBP18.76■□□□□ 0.59
USHBP1-210ENST00000600286 A0A1W2PQY0 241 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms