RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 TRIM43BA6NCK2 446 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 NOP56O00567 594 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 PSMD10O75832 226 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 TCF7P36402 384 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 HIC1Q14526 733 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 MFSD10Q14728 455 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 ABHD15Q6UXT9 468 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 NOSTRINQ8IVI9 506 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 SEPT1Q8WYJ6 367 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 HAS1Q92839 578 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 GJA10Q969M2 543 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 TRIM43Q96BQ3 446 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 RIT2Q99578 217 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 TBC1D22BQ9NU19 505 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 KIF3AQ9Y496 699 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 MROH7Q68CQ1 1323 aa18.15■□□□□ 0.5
PRKCSH-213ENST00000591510 KIAA0355O15063 1070 aa18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 ITGB8P26012 769 aa18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 PTPN11Q06124 597 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 SAFBQ15424 915 aaKnown RBP eCLIP18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 KIAA0753Q2KHM9 967 aa18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 VTI1AQ96AJ9 217 aa18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 TRPV6Q9H1D0 765 aa18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 ZMYND8Q9ULU4 1186 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 NR2E3Q9Y5X4 410 aa18.14■□□□□ 0.49
PRKCSH-213ENST00000591510 H3BRB1 525 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 B4GALT4O60513 344 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 CLTBP09497 229 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 ZNF746Q6NUN9 644 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 KATNAL1Q9BW62 490 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 PRO3102Q9H379 93 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 TUT1Q9H6E5 874 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 TRMT13Q9NUP7 481 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 VAV3Q9UKW4 847 aa18.13■□□□□ 0.49
PRKCSH-213ENST00000591510 DDX39AO00148 427 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 TBX3O15119 743 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 SUPT20HL2P0C7V6 817 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 TOB1P50616 345 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 KRT76Q01546 638 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 SPIRE1Q08AE8 756 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 PRPF38BQ5VTL8 546 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 GDF6Q6KF10 455 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 AFAP1L1Q8TED9 768 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 NAP1L4Q99733 375 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 UNC45AQ9H3U1 944 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 HDAC6Q9UBN7 1215 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 GTF2IRD1Q9UHL9 959 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 TRIOBPQ9H2D6 2365 aa18.12■□□□□ 0.49
PRKCSH-213ENST00000591510 DCDC2CA8MYV0 355 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 SYN1P17600 705 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 ADAM17P78536 824 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 UTP14CQ5TAP6 766 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 LRCH2Q5VUJ6 765 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 CCDC60Q8IWA6 550 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 FAM20AQ96MK3 541 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 MTMR9Q96QG7 549 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 RNPEPQ9H4A4 650 aa18.11■□□□□ 0.49
PRKCSH-213ENST00000591510 MYH9P35579 1960 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 IGSF9BQ9UPX0 1349 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 GAS7O60861 476 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 SMIM10L2AP0DMW4 78 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 SMIM10L2BP0DMW5 78 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 LARP1BQ659C4 914 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 PLPPR4Q7Z2D5 763 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 SMAP1Q8IYB5 467 aaPredicted RBP18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 DHX38Q92620 1227 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 GDF15Q99988 308 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 NOC4LQ9BVI4 516 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 TMEM60Q9H2L4 133 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 SMARCAD1Q9H4L7 1026 aa18.1■□□□□ 0.49
PRKCSH-213ENST00000591510 TANC1Q9C0D5 1861 aa18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 ATP4AP20648 1035 aa18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 ZNF200P98182 395 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 HSCBQ8IWL3 235 aa18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 C4orf32Q8N8J7 132 aa18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 TEKT3Q9BXF9 490 aa18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 ZNF215Q9UL58 517 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 MAFBQ9Y5Q3 323 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-213ENST00000591510 KAT6AQ92794 2004 aa18.08■□□□□ 0.49
PRKCSH-213ENST00000591510 UMODL1Q5DID0 1318 aa18.08■□□□□ 0.49
PRKCSH-213ENST00000591510 LAMA3Q16787 3333 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 WDR64B1ANS9 1081 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 EML1O00423 815 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 TLR3O15455 904 aaKnown RBP18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 SYT1P21579 422 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 MAGEA10P43363 369 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 RBL2Q08999 1139 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 ORC2Q13416 577 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 NBR1Q14596 966 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 PLCB4Q15147 1175 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 TRIM71Q2Q1W2 868 aaKnown RBP18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 FAM47CQ5HY64 1035 aa18.08■□□□□ 0.48
PRKCSH-213ENST00000591510 MIS18BP1Q6P0N0 1132 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms