RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 CASTP20810 708 aaKnown RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 CHMP4BP1P59074 171 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 ERVK-21P61565 698 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 WDR5P61964 334 aaKnown RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 DEFB103AP81534 67 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 IKBKEQ14164 716 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 LEXMQ3ZCV2 418 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 C20orf194Q5TEA3 1177 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 GDF6Q6KF10 455 aaPredicted RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 CNKSR3Q6P9H4 555 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 SLC30A10Q6XR72 485 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 LRRC8DQ7L1W4 858 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 TMCO2Q7Z6W1 182 aaPredicted RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 FAM178BQ8IXR5 827 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 GJD3Q8N144 294 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 KCTD17Q8N5Z5 321 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 PRR7Q8TB68 274 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 PI4K2BQ8TCG2 481 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 AFG1LQ8WV93 481 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 KAT2BQ92831 832 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 TTC14Q96N46 770 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 TGS1Q96RS0 853 aaKnown RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 TMEM47Q9BQJ4 181 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 FSD1Q9BTV5 496 aa6.26□□□□□ -1.41
VAPA-207ENST00000583879 GREB1LQ9C091 1923 aaPredicted RBP6.26□□□□□ -1.41
VAPA-207ENST00000583879 FRMPD2Q68DX3 1309 aaPredicted RBP6.25□□□□□ -1.41
VAPA-207ENST00000583879 LINC01553A4QN01 128 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 EFCAB14O75071 495 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 FGAP02671 866 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 MMP3P08254 477 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 SNHG28P0DPA3 235 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 PDHBP11177 359 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 CKBP12277 381 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 ALADP13716 330 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 ARHGAP1Q07960 439 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 RBL2Q08999 1139 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 ZNF543Q08ER8 600 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 ALX1Q15699 326 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 LY6KQ17RY6 165 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 VPS53Q5VIR6 699 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 DESI1Q6ICB0 168 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 ALYREFQ86V81 257 aaKnown RBP6.25□□□□□ -1.41
VAPA-207ENST00000583879 GDPD5Q8WTR4 605 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 SPIRE2Q8WWL2 714 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 TBC1D5Q92609 795 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 DHX38Q92620 1227 aaKnown RBP6.25□□□□□ -1.41
VAPA-207ENST00000583879 KLF16Q9BXK1 252 aaPredicted RBP6.25□□□□□ -1.41
VAPA-207ENST00000583879 MAF1Q9H063 256 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 UBE2ZQ9H832 354 aaPredicted RBP6.25□□□□□ -1.41
VAPA-207ENST00000583879 TOMM22Q9NS69 142 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 HDAC6Q9UBN7 1215 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 RCAN3Q9UKA8 241 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 MTUS1Q9ULD2 1270 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 INSL6Q9Y581 213 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 REV3LO60673 3130 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 WDR19Q8NEZ3 1342 aa6.25□□□□□ -1.41
VAPA-207ENST00000583879 PPFIA3O75145 1194 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 EIF3JO75822 258 aaKnown RBP6.24□□□□□ -1.41
VAPA-207ENST00000583879 UPP2O95045 317 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 ZIC2O95409 532 aaPredicted RBP6.24□□□□□ -1.41
VAPA-207ENST00000583879 GH1P01241 217 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 IL9P15248 144 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 KCNA5P22460 613 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 PTK7Q13308 1070 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 LAMC2Q13753 1193 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 ARID5BQ14865 1188 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 STXBP2Q15833 593 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 DGKDQ16760 1214 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 TCTN1Q2MV58 587 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 RRP12Q5JTH9 1297 aaKnown RBP6.24□□□□□ -1.41
VAPA-207ENST00000583879 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 ZNF618Q5T7W0 954 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 FAM117BQ6P1L5 589 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.24□□□□□ -1.412e-8■■■□□ 15.2
VAPA-207ENST00000583879 SEPT14Q6ZU15 432 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 CHST3Q7LGC8 479 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 TMEM151AQ8N4L1 468 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 C7orf31Q8N865 590 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 NEK9Q8TD19 979 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 SYTL5Q8TDW5 730 aaPredicted RBP6.24□□□□□ -1.41
VAPA-207ENST00000583879 NSUN6Q8TEA1 469 aaKnown RBP6.24□□□□□ -1.41
VAPA-207ENST00000583879 TAAR1Q96RJ0 339 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 IWS1Q96ST2 819 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 CRBNQ96SW2 442 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 ALG1Q9BT22 464 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 KATNAL1Q9BW62 490 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 UBA5Q9GZZ9 404 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 HELLSQ9NRZ9 838 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 GTF2IRD1Q9UHL9 959 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 CTNNA3Q9UI47 895 aa6.24□□□□□ -1.41
VAPA-207ENST00000583879 DDX41Q9UJV9 622 aaKnown RBP6.24□□□□□ -1.41
VAPA-207ENST00000583879 MYH8P13535 1937 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 HAS3O00219 553 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 PPFIA4O75335 1185 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 LGR5O75473 907 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 AMHP03971 560 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 GOLGA8HP0CJ92 632 aa6.23□□□□□ -1.41
VAPA-207ENST00000583879 PCP11498 1178 aaKnown RBP6.23□□□□□ -1.41
VAPA-207ENST00000583879 NDUFV2P19404 249 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms