RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 CPP00450 1065 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 DGCR2P98153 550 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 LSM12Q3MHD2 195 aaKnown RBP7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 DENND5AQ6IQ26 1287 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 TRIM48Q8IWZ4 208 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 REXO1L1PQ8IX06 675 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 FUKQ8N0W3 1084 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 CDIP1Q9H305 208 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 ACBD3Q9H3P7 528 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 ZFP69BQ9UJL9 534 aa7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.26□□□□□ -1.25
SMCHD1-207ENST00000581711 KRIT1O00522 736 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 PLSCR1O15162 318 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 CKMP06732 381 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 KCNJ6P48051 423 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 GRIN1Q05586 938 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 SKIDA1Q1XH10 827 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 CCDC140Q96MF4 163 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 KATNBL1Q9H079 304 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 PTPN22Q9Y2R2 807 aa7.25□□□□□ -1.25
SMCHD1-207ENST00000581711 SLC27A2O14975 620 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 GJA8P48165 433 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 GFRA1P56159 465 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 STPG3Q8N7X2 389 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 TMEM145Q8NBT3 493 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 SLC6A20Q9NP91 592 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 KCND1Q9NSA2 647 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 LRP2BPQ9P2M1 347 aa7.24□□□□□ -1.25
SMCHD1-207ENST00000581711 ZNF888P0CJ79 500 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 ACO1P21399 889 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 ERCC5P28715 1186 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 GLRBP48167 497 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 USP10Q14694 798 aaKnown RBP7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 ZNF568Q3ZCX4 644 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 SV2CQ496J9 727 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 PIP4K2CQ8TBX8 421 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 CLEC4DQ8WXI8 215 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 C1orf159Q96HA4 380 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 ARHGAP20Q9P2F6 1191 aa7.23□□□□□ -1.25
SMCHD1-207ENST00000581711 RAD17O75943 681 aa7.22□□□□□ -1.25
SMCHD1-207ENST00000581711 NANOS3P60323 173 aaKnown RBP7.22□□□□□ -1.25
SMCHD1-207ENST00000581711 RAC3P60763 192 aa7.22□□□□□ -1.25
SMCHD1-207ENST00000581711 Q6ZSN1 163 aa7.22□□□□□ -1.25
SMCHD1-207ENST00000581711 IGSF5Q9NSI5 407 aa7.22□□□□□ -1.25
SMCHD1-207ENST00000581711 NPFFR2Q9Y5X5 522 aa7.22□□□□□ -1.25
SMCHD1-207ENST00000581711 A0A087X1B8 175 aa7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 C1SP09871 688 aa7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 INHBCP55103 352 aa7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 C1orf210Q8IVY1 113 aa7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 RBM12BQ8IXT5 1001 aaKnown RBP7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 NEU4Q8WWR8 484 aaPredicted RBP7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 JAM3Q9BX67 310 aa7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 TGIF2Q9GZN2 237 aa7.21□□□□□ -1.26
SMCHD1-207ENST00000581711 H0Y858 1186 aa7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 FAHP16930 419 aa7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 PAN2Q504Q3 1202 aaKnown RBP7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 C6orf15Q6UXA7 325 aaPredicted RBP7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 ANAPC16Q96DE5 110 aa7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 CCSER2Q9H7U1 834 aa7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 OAZ3Q9UMX2 235 aa7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 SLC30A1Q9Y6M5 507 aa7.2□□□□□ -1.26
SMCHD1-207ENST00000581711 PFKPQ01813 784 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 TUSC3Q13454 348 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 SLC35F1Q5T1Q4 408 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 CD276Q5ZPR3 534 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 POLNQ7Z5Q5 900 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 CACTINQ8WUQ7 758 aaKnown RBP7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 SEC16BQ96JE7 1060 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 CARD11Q9BXL7 1154 aa7.19□□□□□ -1.26
SMCHD1-207ENST00000581711 IL18BPO95998 194 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 ENO2P09104 434 aaPredicted RBP7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 CR2P20023 1033 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 RNF151Q2KHN1 245 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 KRTAP15-1Q3LI76 137 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 FAM89AQ96GI7 184 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 PLEKHG4BQ96PX9 1271 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 DPYSL5Q9BPU6 564 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 PPARGC1AQ9UBK2 798 aaKnown RBP7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 STRIP2Q9ULQ0 834 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 INPP5FQ9Y2H2 1132 aa7.18□□□□□ -1.26
SMCHD1-207ENST00000581711 SUSD5O60279 629 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 LTFP02788 710 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 MAMDC4Q6UXC1 1216 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 LDLRAD3Q86YD5 345 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 OR14A2Q96R54 314 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 TACO1Q9BSH4 297 aaKnown RBP7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 CAPN10Q9HC96 672 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 PCSK5Q92824 1860 aa7.17□□□□□ -1.26
SMCHD1-207ENST00000581711 ZNF839A8K0R7 811 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 B2RBV5 119 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 ACRV1P26436 265 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 OTOP3Q7RTS5 596 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 DNAJC10Q8IXB1 793 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 FAM178BQ8IXR5 827 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 UHMK1Q8TAS1 419 aaKnown RBP7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 PDGFDQ9GZP0 370 aaPredicted RBP7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 GPR27Q9NS67 375 aa7.16□□□□□ -1.26
SMCHD1-207ENST00000581711 U2SURPO15042 1029 aaKnown RBP7.15□□□□□ -1.26
SMCHD1-207ENST00000581711 MSCO60682 206 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms