RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SNX25Q9H3E2 840 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 CAPN10Q9HC96 672 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 FOXO3O43524 673 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 MAGEA8P43361 318 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 TMED10P49755 219 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 DDB1Q16531 1140 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 ATP11CQ8NB49 1132 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 ZSCAN18Q8TBC5 510 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 PIP4K2CQ8TBX8 421 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 PARVBQ9HBI1 364 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 SOS1Q07889 1333 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 PTGDRQ13258 359 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 HDDC2Q7Z4H3 204 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 EZH1Q92800 747 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 CAPN11Q9UMQ6 739 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 CFAP69A5D8W1 941 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 PYGBP11216 843 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 STXBP2Q15833 593 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 CCNYQ8ND76 341 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 MYLK2Q9H1R3 596 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 RPAP3Q9H6T3 665 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 UHRF1BP1Q6BDS2 1440 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 MYH14Q7Z406 1995 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 CIITAP33076 1130 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 LIG4P49917 911 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 MRPS15P82914 257 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 DRAXINQ8NBI3 349 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 CCDC51Q96ER9 411 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 REXO4Q9GZR2 422 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 IFT122Q9HBG6 1241 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 IPO5O00410 1097 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 SPTLC2O15270 562 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 HDAC4P56524 1084 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 KLC1Q07866 573 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 CDKL2Q92772 493 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 TMEM232C9JQI7 657 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 UQCRFS1P1P0C7P4 283 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 TOMM20Q15388 145 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 ZNF174Q15697 407 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 ANKRD20A4Q4UJ75 823 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 FAM133BQ5BKY9 247 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 ANKRD20A8PQ5CZ79 823 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 ANKRD20A2Q5SQ80 823 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 ANKRD20A1Q5TYW2 823 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 CYB5D1Q6P9G0 228 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 MAP3K2Q9Y2U5 619 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 NUGGCQ68CJ6 796 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 KCTD16Q68DU8 428 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 KLHL25Q9H0H3 589 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 AFF4Q9UHB7 1163 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 PSMC1P62191 440 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 NAALADL2Q58DX5 795 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 C3orf20Q8ND61 904 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 MAP3K13O43283 966 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 YY1P25490 414 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 AK2P54819 239 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 PARVGQ9HBI0 331 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 KLHL14Q9P2G3 628 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 TRPA1O75762 1119 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 SUN1O94901 812 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 FOSL2P15408 326 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 ESRRGP62508 458 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 HADHQ16836 314 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 BTN2A1Q7KYR7 527 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 KLF18A0A0U1RQI7 1052 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 GFAPP14136 432 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 MRPL28Q13084 256 aaKnown RBP9.5□□□□□ -0.89
CDH8-203ENST00000577390 CNBD1Q8NA66 436 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 POLR3EQ9NVU0 708 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 PDP2Q9P2J9 529 aa9.5□□□□□ -0.89
CDH8-203ENST00000577390 hCG_2014768A0A024R1R8 64 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 PEX1O43933 1283 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 PRDM1O75626 825 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 ALDH1A2O94788 518 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 UFL1O94874 794 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 TRIM37O94972 964 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 EIF2B5Q13144 721 aaKnown RBP9.49□□□□□ -0.89
CDH8-203ENST00000577390 ARMC6Q6NXE6 501 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 ARMCX5Q6P1M9 558 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 NLRP14Q86W24 1093 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDH8-203ENST00000577390 ARHGAP31Q2M1Z3 1444 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 UBN2Q6ZU65 1347 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 POLGP54098 1239 aaPredicted RBP9.49□□□□□ -0.89
CDH8-203ENST00000577390 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 EXOC3O60645 756 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 MTX1Q13505 466 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 ESRP1Q6NXG1 681 aaKnown RBP9.49□□□□□ -0.89
CDH8-203ENST00000577390 SARS2Q9NP81 518 aaKnown RBP9.49□□□□□ -0.89
CDH8-203ENST00000577390 RAB20Q9NX57 234 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 CHD2O14647 1828 aaKnown RBP9.49□□□□□ -0.89
CDH8-203ENST00000577390 P4HA2O15460 535 aa9.49□□□□□ -0.89
CDH8-203ENST00000577390 CYP2E1P05181 493 aaPredicted RBP9.49□□□□□ -0.89
CDH8-203ENST00000577390 ST13P50502 369 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms