RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 TRIM37O94972 964 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 NMT1P30419 496 aaKnown RBP16.3■□□□□ 0.2
PRPF8-216ENST00000577001 MEA1Q16626 185 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 FAM182AQ5T1J6 154 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 TRIM58Q8NG06 486 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
PRPF8-216ENST00000577001 NOX5Q96PH1 765 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 GOPCQ9HD26 462 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
PRPF8-216ENST00000577001 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 PTK2Q05397 1052 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 TTMPQ5BVD1 217 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 MEX3CQ5U5Q3 659 aaKnown RBP16.29■□□□□ 0.2
PRPF8-216ENST00000577001 ZNF746Q6NUN9 644 aaPredicted RBP16.29■□□□□ 0.2
PRPF8-216ENST00000577001 PYM1Q9BRP8 204 aaKnown RBP16.29■□□□□ 0.2
PRPF8-216ENST00000577001 EEF2P13639 858 aaKnown RBP16.29■□□□□ 0.2
PRPF8-216ENST00000577001 ODF2Q5BJF6 829 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 SERPINB13Q9UIV8 391 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 USP21Q9UK80 565 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 NOL4O94818 638 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 CEP85LQ5SZL2 805 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 MTMR9Q96QG7 549 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 NUP58Q9BVL2 599 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 SH3GLB2Q9NR46 395 aa16.29■□□□□ 0.2
PRPF8-216ENST00000577001 CLRN2A0PK11 232 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 DDTLA6NHG4 134 aaPredicted RBP16.28■□□□□ 0.2
PRPF8-216ENST00000577001 TMOD1P28289 359 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 FLT3P36888 993 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 SCFD1Q8WVM8 642 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 RAD51CO43502 376 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 SSTR3P32745 418 aaPredicted RBP16.28■□□□□ 0.2
PRPF8-216ENST00000577001 UBLCP1Q8WVY7 318 aaPredicted RBP16.28■□□□□ 0.2
PRPF8-216ENST00000577001 SPZ1Q9BXG8 430 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 MYO1AQ9UBC5 1043 aa16.28■□□□□ 0.2
PRPF8-216ENST00000577001 HSF2BPO75031 334 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 IRAK1P51617 712 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 ADCY1Q08828 1119 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 NNTQ13423 1086 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 RETREG2Q8NC44 543 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 CUL5Q93034 780 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 DNAJC19Q96DA6 116 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 CAPS2Q9BXY5 557 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 OSGEPQ9NPF4 335 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 DNAJC17Q9NVM6 304 aaKnown RBP16.27■□□□□ 0.2
PRPF8-216ENST00000577001 STIM2Q9P246 746 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 AMACRQ9UHK6 382 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 DOT1LQ8TEK3 1739 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.2
PRPF8-216ENST00000577001 FKBP3Q00688 224 aaKnown RBP16.27■□□□□ 0.2
PRPF8-216ENST00000577001 CFAP58Q5T655 872 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 CASKIN2Q8WXE0 1202 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
PRPF8-216ENST00000577001 GPR75-ASB3A0A0A6YYF3 556 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 NDUFAB1O14561 156 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 SP4Q02446 784 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 ASIC2Q16515 512 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 HGSNATQ68CP4 663 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 TSPYL1Q9H0U9 437 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 ZNF287Q9HBT7 754 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 NR2E1Q9Y466 385 aa16.27■□□□□ 0.19
PRPF8-216ENST00000577001 CENPFP49454 3210 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 FECHP22830 423 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 WDR93Q6P2C0 686 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 ZNF571Q7Z3V5 609 aaPredicted RBP16.26■□□□□ 0.19
PRPF8-216ENST00000577001 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 RAB34Q9BZG1 259 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
PRPF8-216ENST00000577001 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 JAG1P78504 1218 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 DGKZQ13574 1117 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 CDC37Q16543 378 aaPredicted RBP16.26■□□□□ 0.19
PRPF8-216ENST00000577001 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 CDC42EP5Q6NZY7 148 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 MIGA2Q7L4E1 593 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 CPNE8Q86YQ8 564 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 EHBP1Q8NDI1 1231 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 TAF4BQ92750 862 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 REEP2Q9BRK0 252 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 TRIM51Q9BSJ1 452 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 USP20Q9Y2K6 914 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 LEMD3Q9Y2U8 911 aa16.26■□□□□ 0.19
PRPF8-216ENST00000577001 TTLL1O95922 423 aa16.25■□□□□ 0.19
PRPF8-216ENST00000577001 ZNF543Q08ER8 600 aa16.25■□□□□ 0.19
PRPF8-216ENST00000577001 ARSHQ5FYA8 562 aa16.25■□□□□ 0.19
PRPF8-216ENST00000577001 RNPC3Q96LT9 517 aaKnown RBP16.25■□□□□ 0.19
PRPF8-216ENST00000577001 CCDC113Q9H0I3 377 aa16.25■□□□□ 0.19
PRPF8-216ENST00000577001 ZC3H4Q9UPT8 1303 aaKnown RBP16.25■□□□□ 0.19
PRPF8-216ENST00000577001 ATMINO43313 823 aaPredicted RBP16.25■□□□□ 0.19
PRPF8-216ENST00000577001 BUB1BO60566 1050 aaPredicted RBP16.25■□□□□ 0.19
PRPF8-216ENST00000577001 CYP11B2P19099 503 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms