RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KLHL33A6NCF5 533 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 FAM170BA6NMN3 283 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 PRRT4C9JH25 899 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 EPB41L2O43491 1005 aaKnown RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 RBP3P10745 1247 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 ZKSCAN1P17029 563 aaPredicted RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 VCAM1P19320 739 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 ADMP35318 185 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 SOX4Q06945 474 aaPredicted RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 FAPQ12884 760 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC9A5Q14940 896 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 ELF2Q15723 593 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 NKG7Q16617 165 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 TUBB8Q3ZCM7 444 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 CYP27C1Q4G0S4 372 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 TMEM177Q53S58 311 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 HP1BP3Q5SSJ5 553 aaPredicted RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 BROXQ5VW32 411 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 CDPF1Q6NVV7 123 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 ANKLE2Q86XL3 938 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 MCATQ8IVS2 390 aaKnown RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 SUGP1Q8IWZ8 645 aaKnown RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 PPIL6Q8IXY8 311 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 DRC7Q8IY82 874 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 CAMKK1Q8N5S9 505 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 CHST14Q8NCH0 376 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 FAM156AQ8NDB6 213 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC35G2Q8TBE7 412 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 TGFBRAP1Q8WUH2 860 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 EZH1Q92800 747 aaPredicted RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 CCDC138Q96M89 665 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 PPP1R16BQ96T49 567 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 TBCBQ99426 244 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 NUP88Q99567 741 aaPredicted RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 PHF20Q9BVI0 1012 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 RNF38Q9H0F5 515 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 MS4A5Q9H3V2 200 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 FAM204AQ9H8W3 233 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 GP6Q9HCN6 339 aa4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 TPX2Q9ULW0 747 aaKnown RBP4.04□□□□□ -1.76
HERPUD1-211ENST00000566550 PTPDC1A2A3K4 754 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 GOLGA8AA7E2F4 631 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 GOLGA8BA8MQT2 603 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 K7ESF4 209 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 TRAF5O00463 557 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 MEIS1O00470 390 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 SHOXO15266 292 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 VAMP4O75379 141 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 RHOBTB3O94955 611 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 ZRANB2O95218 330 aaKnown RBP eCLIP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 CAPNS1P04632 268 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC5A1P13866 664 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 TYRP1P17643 537 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 KCNA6P17658 529 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 HOXC12P31275 282 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 ALDH5A1P51649 535 aaPredicted RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 GTF2A2P52657 109 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 POU5F1Q01860 360 aaKnown RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 SCRN1Q12765 414 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 AUHQ13825 339 aaKnown RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 LRRC32Q14392 662 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 PDCD2Q16342 344 aaPredicted RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 KIAA0753Q2KHM9 967 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 NBPF9Q3BBW0 867 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 NBPF12Q5TAG4 269 aaPredicted RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 ZBTB37Q5TC79 503 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 PRAMEF13Q5VWM6 474 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC6A19Q695T7 634 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 STYK1Q6J9G0 422 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 LDHAL6AQ6ZMR3 332 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 CDC37L1Q7L3B6 337 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 KIF18BQ86Y91 864 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 SIAH1Q8IUQ4 282 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 HID1Q8IV36 788 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 C7orf61Q8IZ16 206 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 SHISA5Q8N114 240 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 FIBCD1Q8N539 461 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 PPP1R35Q8TAP8 253 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 ENOX1Q8TC92 643 aaKnown RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 DCAF4Q8WV16 495 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 ACO2Q99798 780 aaKnown RBP4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 NKX2-4Q9H2Z4 354 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 RSAD1Q9HA92 442 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 RAD18Q9NS91 495 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 RRN3Q9NYV6 651 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 RTEL1Q9NZ71 1219 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF69Q9UC07 566 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 LRCH1Q9Y2L9 728 aa4.03□□□□□ -1.76
HERPUD1-211ENST00000566550 LOC100289279A0A1B0GTE1 492 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 LRRC10BA6NIK2 292 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 TRIM75PA6NK02 468 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SLFN14P0C7P3 912 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 DRD2P14416 443 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 FUT4P22083 530 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 RRM1P23921 792 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 CCT5P48643 541 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ZNF445P59923 1031 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 GPSM2P81274 684 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms