RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 COL4A3BPQ9Y5P4 624 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SLIT2O94813 1529 aa22.45■■□□□ 1.18
MAP1LC3B-206ENST00000564844 FGRP09769 529 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TNFRSF8P28908 595 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 HSPA9P38646 679 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 FAM133BQ5BKY9 247 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TCERG1LQ5VWI1 586 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SPTY2D1Q68D10 685 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 METTL13Q8N6R0 699 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SH3RF3Q8TEJ3 882 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ZNF335Q9H4Z2 1342 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TAF1P21675 1872 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 A6NNZ2 444 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 IL6STP40189 918 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SLCO1A2P46721 670 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 NAA25Q14CX7 972 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ASIC2Q16515 512 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TUBB8Q3ZCM7 444 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GJB7Q6PEY0 223 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MYOCDQ8IZQ8 938 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TRAPPC3O43617 180 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CTNND1O60716 968 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CLNS1AP54105 237 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PPP2R2AP63151 447 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 DDR1Q08345 913 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SPATS2Q86XZ4 545 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CLEC10AQ8IUN9 316 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 HVCN1Q96D96 273 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 VEZTQ9HBM0 779 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 DONSONQ9NYP3 566 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SLC12A6Q9UHW9 1150 aa22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 NOC2LQ9Y3T9 749 aaKnown RBP22.44■■□□□ 1.18
MAP1LC3B-206ENST00000564844 COL4A1P02462 1669 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 E9PMD0 336 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 UBE2SQ16763 222 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ISCUQ9H1K1 167 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 L3MBTL1Q9Y468 752 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SSU72P8A0A1W2PR75 194 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ERVV-1B6SEH8 477 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 H0YGN5 161 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KIF4AO95239 1232 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GRM4Q14833 912 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 DCAF17Q5H9S7 520 aaPredicted RBP22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 UBAP2Q5T6F2 1119 aaKnown RBP22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GUF1Q8N442 669 aaKnown RBP22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ARFGAP2Q8N6H7 521 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 THOC1Q96FV9 657 aaKnown RBP22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MCM8Q9UJA3 840 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TSKSQ9UJT2 592 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 NFS1Q9Y697 457 aa22.43■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ADAMTSL3P82987 1691 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PARP4Q9UKK3 1724 aaKnown RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 NEBLO76041 1014 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 BYSLQ13895 437 aaKnown RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GRIK5Q16478 980 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PPP4R3AQ6IN85 833 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ZNF571Q7Z3V5 609 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 DAAM2Q86T65 1068 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 TBC1D1Q86TI0 1168 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 AK8Q96MA6 479 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 NLRP3Q96P20 1036 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MTFR1LQ9H019 292 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 C6orf50Q9HD87 102 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PLCB1Q9NQ66 1216 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CEP72Q9P209 647 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 BUB1BO60566 1050 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CAND2O75155 1236 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SHBGP04278 402 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 HERC4Q5GLZ8 1057 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MYH3P11055 1940 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ABCB4P21439 1286 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GBP2P32456 591 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ZNF211Q13398 564 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PREPLQ4J6C6 727 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 REXO1Q8N1G1 1221 aaKnown RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CUEDC2Q9H467 287 aa22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 LUC7LQ9NQ29 371 aaKnown RBP22.42■■□□□ 1.18
MAP1LC3B-206ENST00000564844 NTSR2O95665 410 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 FGFR1OPO95684 399 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 FKBP3Q00688 224 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 COASYQ13057 564 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GKAP1Q5VSY0 366 aaPredicted RBP22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 MSL1Q68DK7 614 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PEX26Q7Z412 305 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CD302Q8IX05 232 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 BCAS3Q9H6U6 928 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SH3GLB2Q9NR46 395 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PANK4Q9NVE7 773 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SLAIN2Q9P270 581 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 SEC63Q9UGP8 760 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 CD2APQ9Y5K6 639 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PPP2R5AQ15172 486 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 KRT79Q5XKE5 535 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 YTHDF3Q7Z739 585 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 GLG1Q92896 1179 aa22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ARPP21Q9UBL0 812 aaPredicted RBP22.41■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ZNF804BA4D1E1 1349 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 PRPHP41219 470 aa22.4■■□□□ 1.18
MAP1LC3B-206ENST00000564844 ADAM9Q13443 819 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms