RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PSAPP07602 524 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 SLFN14P0C7P3 912 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 TXNP10599 105 aaKnown RBP14.37□□□□□ -0.11
CLK3-214ENST00000564096 PLCG1P19174 1290 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 RPA1P27694 616 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 FLT3LGP49771 235 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 PRMT2P55345 433 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 HYIQ5T013 277 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 MIS18BP1Q6P0N0 1132 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 B3GNT9Q6UX72 402 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 KRBA2Q6ZNG9 492 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 USP49Q70CQ1 688 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 ATP6V0A1Q93050 837 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 EIF2AK1Q9BQI3 630 aaKnown RBP14.37□□□□□ -0.11
CLK3-214ENST00000564096 MLXIPQ9HAP2 919 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 SRRDQ9UH36 339 aa14.37□□□□□ -0.11
CLK3-214ENST00000564096 RBM47A0AV96 593 aaKnown RBP14.36□□□□□ -0.11
CLK3-214ENST00000564096 ATP9AO75110 1047 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 SNAI1O95863 264 aaPredicted RBP14.36□□□□□ -0.11
CLK3-214ENST00000564096 CTGFP29279 349 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 CDC25AP30304 524 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 ACVR2BQ13705 512 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 TMEM119Q4V9L6 283 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 CYFIP1Q7L576 1253 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 ELOA2Q8IYF1 753 aaPredicted RBP14.36□□□□□ -0.11
CLK3-214ENST00000564096 CCDC43Q96MW1 224 aaKnown RBP14.36□□□□□ -0.11
CLK3-214ENST00000564096 MMTAG2Q9BU76 263 aaKnown RBP14.36□□□□□ -0.11
CLK3-214ENST00000564096 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 DDX41Q9UJV9 622 aaKnown RBP14.36□□□□□ -0.11
CLK3-214ENST00000564096 PCDHA10Q9Y5I2 948 aa14.36□□□□□ -0.11
CLK3-214ENST00000564096 MGAMO43451 1857 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 CASP8AP2Q9UKL3 1982 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 POTEB3A0JP26 581 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 ACTN4O43707 911 aaKnown RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 FARP2O94887 1054 aaPredicted RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 GH1P01241 217 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 MYL1P05976 194 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 P4HBP07237 508 aaKnown RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 ACTR2P61160 394 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 AMPD3Q01432 767 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 SP4Q02446 784 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 CYP4A11Q02928 519 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 E2F4Q16254 413 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 CELF3Q5SZQ8 465 aaKnown RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 POTEBQ6S5H4 581 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 DHX37Q8IY37 1157 aaKnown RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 DNAJC5GQ8N7S2 189 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 RAET1EQ8TD07 263 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 ZNF296Q8WUU4 475 aaPredicted RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
CLK3-214ENST00000564096 LXNQ9BS40 222 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 KATNBL1Q9H079 304 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 ZSWIM4Q9H7M6 989 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
CLK3-214ENST00000564096 A0A087X0B3 334 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 EML1O00423 815 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 BACH1O14867 736 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 MED24O75448 989 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 ARIH2O95376 493 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 CCNE2O96020 404 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 SUPT20HL2P0C7V6 817 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 QARSP47897 775 aaKnown RBP14.34□□□□□ -0.11
CLK3-214ENST00000564096 PSMC5P62195 406 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 GRB10Q13322 594 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 LAMC2Q13753 1193 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 POSTNQ15063 836 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 CCL14Q16627 93 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 LY6KQ17RY6 165 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 DUSP28Q4G0W2 176 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 FAM160B1Q5W0V3 765 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 IQSEC1Q6DN90 963 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 TAPT1Q6NXT6 567 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 CCDC62Q6P9F0 684 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 CATSPER3Q86XQ3 398 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 RAD54LQ92698 747 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 EMID1Q96A84 441 aaPredicted RBP14.34□□□□□ -0.11
CLK3-214ENST00000564096 DYDC2Q96IM9 177 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 SPATA33Q96N06 139 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 PANK2Q9BZ23 570 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 FLRT1Q9NZU1 646 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 SERTAD1Q9UHV2 236 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 DNM3Q9UQ16 869 aa14.34□□□□□ -0.11
CLK3-214ENST00000564096 SMC2O95347 1197 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 HMGCRP04035 888 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 AKR1A1P14550 325 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 CYP2C19P33261 490 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 ADCYAP1R1P41586 468 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 CAMK4Q16566 473 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 ZSCAN23Q3MJ62 389 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 LONRF3Q496Y0 759 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 PDXDC2PQ6P474 469 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 SV2BQ7L1I2 683 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 TPH2Q8IWU9 490 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 SLAIN1Q8ND83 568 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 BANK1Q8NDB2 785 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 TRIB2Q92519 343 aa14.33□□□□□ -0.12
CLK3-214ENST00000564096 PNMA5Q96PV4 448 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms