RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 PDE6BP35913 854 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 RNF219Q5W0B1 726 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-203ENST00000562046 EFHBQ8N7U6 833 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 GPR101Q96P66 508 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-203ENST00000562046 TYW1Q9NV66 732 aaKnown RBP6.25□□□□□ -1.41
CNOT1-203ENST00000562046 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 APOBEC2Q9Y235 224 aaKnown RBP6.25□□□□□ -1.41
CNOT1-203ENST00000562046 NUB1Q9Y5A7 615 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 ATP23Q9Y6H3 246 aa6.25□□□□□ -1.41
CNOT1-203ENST00000562046 SCDO00767 359 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 ABLIM1O14639 778 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 C4BPAP04003 597 aaKnown RBP6.24□□□□□ -1.41
CNOT1-203ENST00000562046 JUNBP17275 347 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-203ENST00000562046 PTPN1P18031 435 aaKnown RBP6.24□□□□□ -1.41
CNOT1-203ENST00000562046 FBLN1P23142 703 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 IL2P60568 153 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 SART3Q15020 963 aaKnown RBP6.24□□□□□ -1.41
CNOT1-203ENST00000562046 ZC3H14Q6PJT7 736 aaKnown RBP6.24□□□□□ -1.41
CNOT1-203ENST00000562046 NBPF11Q86T75 865 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 MIB1Q86YT6 1006 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 TRIM48Q8IWZ4 208 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 FAM168AQ92567 244 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 LIN37Q96GY3 246 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-203ENST00000562046 HOMER2Q9NSB8 354 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 HSPBP1Q9NZL4 362 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 SPO11Q9Y5K1 396 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 WASHC2CQ9Y4E1 1318 aa6.24□□□□□ -1.41
CNOT1-203ENST00000562046 ALG1L2C9J202 215 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 H7C1D1 291 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 BUB1BO60566 1050 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 KRT37O76014 449 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 VIPR1P32241 457 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 GJA4P35212 333 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 KPNA1P52294 538 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 OCRLQ01968 901 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 TMEM62Q0P6H9 643 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 BTBD8Q5XKL5 378 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 CC2D1AQ6P1N0 951 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 NECAB2Q7Z6G3 386 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 SPATS2Q86XZ4 545 aaKnown RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 KIAA1958Q8N8K9 716 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 ELF4Q99607 663 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 BCAS3Q9H6U6 928 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 KCNH7Q9NS40 1196 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 DBR1Q9UK59 544 aaKnown RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
CNOT1-203ENST00000562046 IRS2Q9Y4H2 1338 aa6.23□□□□□ -1.41
CNOT1-203ENST00000562046 RASSF10A6NK89 507 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 PDGFRBP09619 1106 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 SLC9A1P19634 815 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 SDHAP31040 664 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 KIF11P52732 1056 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 SMAD3P84022 425 aaKnown RBP6.22□□□□□ -1.41
CNOT1-203ENST00000562046 GRIN1Q05586 938 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 SMAD2Q15796 467 aaKnown RBP6.22□□□□□ -1.41
CNOT1-203ENST00000562046 ATP13A4Q4VNC1 1196 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 PAN2Q504Q3 1202 aaKnown RBP6.22□□□□□ -1.41
CNOT1-203ENST00000562046 BRDTQ58F21 947 aaPredicted RBP6.22□□□□□ -1.41
CNOT1-203ENST00000562046 CATSPEREQ5SY80 951 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 FAM126BQ8IXS8 530 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 SLC5A4Q9NY91 659 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 DTLQ9NZJ0 730 aa6.22□□□□□ -1.41
CNOT1-203ENST00000562046 MYOCOSA0A1B0GUC4 107 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.21□□□□□ -1.42
CNOT1-203ENST00000562046 HIP1RO75146 1068 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 RAB11FIP3O75154 756 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 LRG1P02750 347 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 FAHP16930 419 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 PTX3P26022 381 aaPredicted RBP6.21□□□□□ -1.42
CNOT1-203ENST00000562046 THBS2P35442 1172 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 GUCY2FP51841 1108 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 PHC1P78364 1004 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 TMPRSS15P98073 1019 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 FAM50AQ14320 339 aaKnown RBP6.21□□□□□ -1.42
CNOT1-203ENST00000562046 EP400NLQ6ZTU2 488 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 TMC6Q7Z403 805 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 AMIGO3Q86WK7 504 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 COG1Q8WTW3 980 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 ZMAT4Q9H898 229 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 VTA1Q9NP79 307 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 ACSS2Q9NR19 701 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 RIC8BQ9NVN3 520 aa6.21□□□□□ -1.42
CNOT1-203ENST00000562046 PEX10O60683 326 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 ASGR2P07307 311 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 IRAK1P51617 712 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 HERVK_113P62684 666 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 ZNF200P98182 395 aaPredicted RBP6.2□□□□□ -1.42
CNOT1-203ENST00000562046 MTMR1Q13613 665 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 TERF2Q15554 542 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 ZNF174Q15697 407 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 CR1LQ2VPA4 569 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 PLEKHG6Q3KR16 790 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 GPR158Q5T848 1215 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 ESRP1Q6NXG1 681 aaKnown RBP6.2□□□□□ -1.42
CNOT1-203ENST00000562046 PRR23BQ6ZRT6 265 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 ZNF605Q86T29 641 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 PROSER1Q86XN7 944 aa6.2□□□□□ -1.42
CNOT1-203ENST00000562046 CPA5Q8WXQ8 436 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms